G1528139


Basic Information

Item Value
gene id G1528139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 23078430 ~ 23078636 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1749575
ctcatccaggatggcacatcaatgcgagctgtggcaagaaggtttgctgtgtatgtcagcgtagtgtccagagcatggaggcgctaccaggagacaggccagtacatcaggagacatggaggaggccgtaggagggcaacaacccagcagcaggaccgctacctccgcctttgtgcaaggaggagcaggaagagcactgccagagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1749575 True 207 lncRNA 0.58 1 23078430 23078636

Neighbor

gene id symbol gene type direction distance location
LOC110495835 en1 coding upstream 304756 22769391 ~ 22773674 (+)
LOC110495834 LOC106574432 coding upstream 325624 22750688 ~ 22752806 (+)
LOC110495829 LOC106574429 coding upstream 364896 22700342 ~ 22713534 (+)
LOC110497098 LOC106574424 coding upstream 437062 22599016 ~ 22641368 (+)
LOC110495826 LOC106575273 coding upstream 482040 22566668 ~ 22596390 (+)
LOC110495843 LOC106574436 coding downstream 106788 23185424 ~ 23198238 (+)
LOC110495847 LOC106574438 coding downstream 190239 23268875 ~ 23273932 (+)
LOC110495849 LOC106574443 coding downstream 240107 23318743 ~ 23342541 (+)
LOC110495853 LOC106574225 coding downstream 475214 23553850 ~ 23564696 (+)
LOC110495857 LOC106575156 coding downstream 486951 23565587 ~ 23570089 (+)
G1528138 NA non-coding upstream 52 23078091 ~ 23078378 (+)
G1528133 NA non-coding upstream 4316 23073809 ~ 23074114 (+)
G1528131 NA non-coding upstream 7712 23070485 ~ 23070718 (+)
G1528125 NA non-coding upstream 17204 23060989 ~ 23061226 (+)
G1528124 NA non-coding upstream 17667 23060514 ~ 23060763 (+)
G1528195 NA non-coding downstream 83087 23161723 ~ 23162166 (+)
G1528210 NA non-coding downstream 99543 23178179 ~ 23178444 (+)
G1528215 NA non-coding downstream 111142 23189778 ~ 23190119 (+)
G1528313 NA non-coding downstream 269444 23348080 ~ 23348315 (+)
G1528328 NA non-coding downstream 290445 23369081 ~ 23369294 (+)
G1525320 NA other upstream 2321018 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 2594717 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 2771526 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 2843250 20206484 ~ 20236753 (+)
G1528194 NA other downstream 80197 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 1442099 24520697 ~ 24525649 (+)
G1530367 NA other downstream 1926125 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 2070347 25133210 ~ 25157338 (+)
G1530785 NA other downstream 2487835 25566471 ~ 25571346 (+)

Expression


Co-expression Network