Gene
RNA
| Item | Value |
|---|---|
| gene id | G1528346 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 23394116 ~ 23394362 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1749845 | True | 247 | lncRNA | 0.39 | 1 | 23394116 | 23394362 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495849 | LOC106574443 | coding | upstream | 51575 | 23318743 ~ 23342541 (+) |
| LOC110495847 | LOC106574438 | coding | upstream | 120184 | 23268875 ~ 23273932 (+) |
| LOC110495843 | LOC106574436 | coding | upstream | 195878 | 23185424 ~ 23198238 (+) |
| LOC110495835 | en1 | coding | upstream | 620442 | 22769391 ~ 22773674 (+) |
| LOC110495834 | LOC106574432 | coding | upstream | 641310 | 22750688 ~ 22752806 (+) |
| LOC110495853 | LOC106574225 | coding | downstream | 159488 | 23553850 ~ 23564696 (+) |
| LOC110495857 | LOC106575156 | coding | downstream | 171225 | 23565587 ~ 23570089 (+) |
| LOC110495855 | LOC106574229 | coding | downstream | 176069 | 23537127 ~ 23586847 (+) |
| LOC110495854 | LOC106574228 | coding | downstream | 193249 | 23587611 ~ 23651133 (+) |
| LOC110495861 | LOC106574235 | coding | downstream | 375186 | 23769548 ~ 23779632 (+) |
| G1528328 | NA | non-coding | upstream | 24822 | 23369081 ~ 23369294 (+) |
| G1528313 | NA | non-coding | upstream | 45801 | 23348080 ~ 23348315 (+) |
| G1528215 | NA | non-coding | upstream | 203997 | 23189778 ~ 23190119 (+) |
| G1528210 | NA | non-coding | upstream | 215672 | 23178179 ~ 23178444 (+) |
| G1528195 | NA | non-coding | upstream | 231950 | 23161723 ~ 23162166 (+) |
| G1528350 | NA | non-coding | downstream | 3156 | 23397518 ~ 23397747 (+) |
| G1528353 | NA | non-coding | downstream | 9567 | 23403929 ~ 23404187 (+) |
| G1528437 | NA | non-coding | downstream | 131156 | 23525518 ~ 23525867 (+) |
| G1528508 | NA | non-coding | downstream | 285388 | 23679750 ~ 23681697 (+) |
| G1528194 | NA | other | upstream | 232825 | 23158833 ~ 23161291 (+) |
| LOC110497098 | LOC106574424 | other | upstream | 782664 | 22599016 ~ 22641368 (+) |
| G1525320 | NA | other | upstream | 2636704 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 2910403 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 3087212 | 20305705 ~ 20306904 (+) |
| LOC110495887 | LOC108430494 | other | downstream | 1126373 | 24520697 ~ 24525649 (+) |
| G1530367 | NA | other | downstream | 1610399 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 1754621 | 25133210 ~ 25157338 (+) |
| G1530785 | NA | other | downstream | 2172109 | 25566471 ~ 25571346 (+) |
| G1530923 | LOC106574292 | other | downstream | 2444144 | 25838506 ~ 25840353 (+) |
