G1528353


Basic Information

Item Value
gene id G1528353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 23403929 ~ 23404187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1749852
acacaatcctgtctcggagctctacggacaattccttcgacctcttggtgtttgctctgacatgcactgtcatctgtgggagcttatatagacaggtgtgtgcctttccaaatcatgtccaatcaattgaatttaacacaggtggactccaatcaagttgtagaaacatctcaaagatgatcaatggaaacaggatgcacctgaactcaatttcaagtcatatagcaaaaggtctgaaaacttacagtatgtaaataag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1749852 True 259 lncRNA 0.41 1 23403929 23404187

Neighbor

gene id symbol gene type direction distance location
LOC110495849 LOC106574443 coding upstream 61388 23318743 ~ 23342541 (+)
LOC110495847 LOC106574438 coding upstream 129997 23268875 ~ 23273932 (+)
LOC110495843 LOC106574436 coding upstream 205691 23185424 ~ 23198238 (+)
LOC110495835 en1 coding upstream 630255 22769391 ~ 22773674 (+)
LOC110495834 LOC106574432 coding upstream 651123 22750688 ~ 22752806 (+)
LOC110495853 LOC106574225 coding downstream 149663 23553850 ~ 23564696 (+)
LOC110495857 LOC106575156 coding downstream 161400 23565587 ~ 23570089 (+)
LOC110495855 LOC106574229 coding downstream 166244 23537127 ~ 23586847 (+)
LOC110495854 LOC106574228 coding downstream 183424 23587611 ~ 23651133 (+)
LOC110495861 LOC106574235 coding downstream 365361 23769548 ~ 23779632 (+)
G1528350 NA non-coding upstream 6182 23397518 ~ 23397747 (+)
G1528346 NA non-coding upstream 9567 23394116 ~ 23394362 (+)
G1528328 NA non-coding upstream 34635 23369081 ~ 23369294 (+)
G1528313 NA non-coding upstream 55614 23348080 ~ 23348315 (+)
G1528215 NA non-coding upstream 213810 23189778 ~ 23190119 (+)
G1528437 NA non-coding downstream 121331 23525518 ~ 23525867 (+)
G1528508 NA non-coding downstream 275563 23679750 ~ 23681697 (+)
G1528564 NA non-coding downstream 346589 23750776 ~ 23751144 (+)
G1528575 NA non-coding downstream 363490 23767677 ~ 23768235 (+)
G1528194 NA other upstream 242638 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 792477 22599016 ~ 22641368 (+)
G1525320 NA other upstream 2646517 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 2920216 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 3097025 20305705 ~ 20306904 (+)
LOC110495887 LOC108430494 other downstream 1116548 24520697 ~ 24525649 (+)
G1530367 NA other downstream 1600574 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 1744796 25133210 ~ 25157338 (+)
G1530785 NA other downstream 2162284 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 2434319 25838506 ~ 25840353 (+)

Expression


Co-expression Network