G1529300


Basic Information

Item Value
gene id G1529300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 23765935 ~ 23766465 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1750919
gagctaatcaccttgttcacctttgactcagaaacctcccttatgatgaagaccggttgagtgtcattcactagcactgagcccaagaaacaagtggaggggttctgtgtcagtaccctgacagagtcaataaagtaggaattgaaggctattgctatttcgactgcatcctgtgttagattgttattcaccatgatttctagtctttttgcagtgttactatggtctttccctgttaacttttttagattctcccatatcaatttagaatttccctttgcttcaccaattatgttaataaaaaagtttgccttggcctgtctgatttctttcatcaccttatttctcaacatggtaaacctacgtctgtcatgctctaatttagattttagggctatttttagagcataatctcgttctttcatcaatttccagatttctccatttagccaaggaagagtgctcttttggccaggtttggatttgattttctttaggaagccatttattgtagtctggattgtggataga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1750919 True 531 lncRNA 0.38 1 23765935 23766465

Neighbor

gene id symbol gene type direction distance location
LOC110495859 LOC106574231 coding downstream 15588 23669154 ~ 23750347 (-)
wdsub1 LOC106574230 coding downstream 104203 23652437 ~ 23661732 (-)
trnat-ugu-38 NA coding downstream 123992 23641871 ~ 23641943 (-)
LOC110495852 LOC106574460 coding downstream 222304 23542411 ~ 23543631 (-)
LOC110495851 LOC106574449 coding downstream 224254 23479558 ~ 23541681 (-)
LOC110495860 LOC106574232 coding upstream 14351 23780816 ~ 23821326 (-)
LOC110497101 LOC106574236 coding upstream 55363 23821828 ~ 23846147 (-)
LOC110495862 LOC106574237 coding upstream 79946 23846411 ~ 23866508 (-)
LOC110495863 LOC106574238 coding upstream 107204 23873669 ~ 23890422 (-)
LOC110495867 LOC106574242 coding upstream 152263 23918728 ~ 23948071 (-)
G1529254 NA non-coding downstream 98610 23667053 ~ 23667325 (-)
G1529252 NA non-coding downstream 99798 23664832 ~ 23666137 (-)
G1529250 NA non-coding downstream 103102 23662611 ~ 23662833 (-)
G1529222 NA non-coding downstream 151929 23613605 ~ 23614006 (-)
G1529206 LOC106574228 non-coding downstream 174707 23591001 ~ 23591228 (-)
G1529302 NA non-coding upstream 2581 23769046 ~ 23769345 (-)
G1529342 NA non-coding upstream 96450 23862915 ~ 23863506 (-)
G1529361 NA non-coding upstream 131135 23897600 ~ 23897819 (-)
G1529362 NA non-coding upstream 132862 23899327 ~ 23899601 (-)
LOC110495841 LOC106574435 other downstream 597344 23008547 ~ 23168591 (-)
G1528018 NA other downstream 880102 22872045 ~ 22885833 (-)
G1527230 NA other downstream 1503473 22262056 ~ 22262462 (-)
LOC110497104 LOC106574262 other upstream 513273 24279738 ~ 24371432 (-)
G1529613 NA other upstream 626910 24393375 ~ 24393684 (-)
G1530967 LOC106574270 other upstream 1383603 25150068 ~ 25150994 (-)
G1531142 NA other upstream 1752956 25519421 ~ 25523180 (-)
LOC110495915 NA other upstream 1806973 25571910 ~ 25574981 (-)

Expression


Co-expression Network