G1528754


Basic Information

Item Value
gene id G1528754
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24072718 ~ 24073113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1750308
CTCATGAACCATAGGACCAATTAACAAATCAAATGAGTTAGTAACAAAtccaaaatcagattttatgtgTCCATTTAAACCACTGTAAATCTACTCCATAGCGGCCTATCGACTTGAAATGTGTCACCACTATCGTGGACGTCCCTAAGATGAACCGTGCTGAATTTGGTTTTGATACCTGAAAAAACAAGGAAACTATGAACAACTCATTCATTGCATATGTAACTCTAACGCTCCAAATGATCTGCAATCATCTTCTCCTCATGAaccatacagtggcaagaaaaagtatgtgaaccctttggaattacctggatttctgcataactTTGACATACAATttcatctgatcttcatctaagtcacaacaatagaccaactcagtgtgcttaaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1750308 True 396 lncRNA 0.37 1 24072718 24073113

Neighbor

gene id symbol gene type direction distance location
LOC110495871 sumo1 coding upstream 75116 23994022 ~ 23997602 (+)
LOC110495865 LOC106574241 coding upstream 154073 23911979 ~ 23918645 (+)
LOC110495861 LOC106574235 coding upstream 293086 23769548 ~ 23779632 (+)
LOC110495854 LOC106574228 coding upstream 421585 23587611 ~ 23651133 (+)
LOC110495855 LOC106574229 coding upstream 485871 23537127 ~ 23586847 (+)
LOC110497102 LOC106574246 coding downstream 5620 24078733 ~ 24100642 (+)
LOC110495875 LOC106575175 coding downstream 38159 24111272 ~ 24122645 (+)
LOC118941123 LOC106574249 coding downstream 41177 24114290 ~ 24116592 (+)
LOC110495876 LOC106575177 coding downstream 49643 24122756 ~ 24134227 (+)
LOC110495879 LOC106574251 coding downstream 74888 24148001 ~ 24153085 (+)
G1528752 NA non-coding upstream 2453 24068776 ~ 24070265 (+)
G1528745 NA non-coding upstream 13763 24058593 ~ 24058955 (+)
G1528744 NA non-coding upstream 14448 24058067 ~ 24058270 (+)
G1528736 NA non-coding upstream 25047 24047382 ~ 24047671 (+)
G1528735 NA non-coding upstream 26295 24045840 ~ 24046423 (+)
G1528755 NA non-coding downstream 690 24073803 ~ 24074013 (+)
G1528763 NA non-coding downstream 13741 24086854 ~ 24087075 (+)
G1528762 NA non-coding downstream 30394 24103507 ~ 24103836 (+)
G1528760 NA non-coding downstream 33097 24106210 ~ 24107775 (+)
G1528766 NA non-coding downstream 56816 24129929 ~ 24130679 (+)
G1528194 NA other upstream 911427 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1461266 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3315306 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 3589005 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 3765814 20305705 ~ 20306904 (+)
LOC110495887 LOC108430494 other downstream 447622 24520697 ~ 24525649 (+)
G1530367 NA other downstream 931648 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 1075870 25133210 ~ 25157338 (+)
G1530785 NA other downstream 1493358 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1765393 25838506 ~ 25840353 (+)

Expression


Co-expression Network