G1528762


Basic Information

Item Value
gene id G1528762
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24103507 ~ 24103836 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1750320
gaagaggcgctgctgtgtgggtggaccaattcagtttgtctgtgatgtgtatgccgaggaacttaaaacttactaccctctccactactgttccatcgacgtgttccctctgctgtttcctgaagtccacaatcatcttcttagttttgttgacgttgagtgtgaggttattttcctgacaccacactccgagggccctcacctcctccctgtaggccgtctcgtcgttgttggtaatcaagcctaccactgttgtgtcgtccgcaaacttgatgattgagttggaggcgtgcgtggccacgcagtcgtgggtgaacagggagtacagga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1750320 True 330 lncRNA 0.52 1 24103507 24103836

Neighbor

gene id symbol gene type direction distance location
LOC110497102 LOC106574246 coding upstream 2865 24078733 ~ 24100642 (+)
LOC110495871 sumo1 coding upstream 105905 23994022 ~ 23997602 (+)
LOC110495865 LOC106574241 coding upstream 184862 23911979 ~ 23918645 (+)
LOC110495861 LOC106574235 coding upstream 323875 23769548 ~ 23779632 (+)
LOC110495854 LOC106574228 coding upstream 452374 23587611 ~ 23651133 (+)
LOC110495875 LOC106575175 coding downstream 7436 24111272 ~ 24122645 (+)
LOC118941123 LOC106574249 coding downstream 10454 24114290 ~ 24116592 (+)
LOC110495876 LOC106575177 coding downstream 18920 24122756 ~ 24134227 (+)
LOC110495879 LOC106574251 coding downstream 44165 24148001 ~ 24153085 (+)
LOC110495878 LOC106574254 coding downstream 49409 24153245 ~ 24167595 (+)
G1528763 NA non-coding upstream 16432 24086854 ~ 24087075 (+)
G1528755 NA non-coding upstream 29494 24073803 ~ 24074013 (+)
G1528754 NA non-coding upstream 30394 24072718 ~ 24073113 (+)
G1528752 NA non-coding upstream 33242 24068776 ~ 24070265 (+)
G1528745 NA non-coding upstream 44552 24058593 ~ 24058955 (+)
G1528760 NA non-coding downstream 2374 24106210 ~ 24107775 (+)
G1528766 NA non-coding downstream 26093 24129929 ~ 24130679 (+)
G1528779 NA non-coding downstream 161686 24265522 ~ 24265839 (+)
G1528789 NA non-coding downstream 175066 24278902 ~ 24279115 (+)
G1528791 NA non-coding downstream 176018 24279854 ~ 24280075 (+)
G1528194 NA other upstream 942216 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1492055 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3346095 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 3619794 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 3796603 20305705 ~ 20306904 (+)
LOC110495887 LOC108430494 other downstream 416899 24520697 ~ 24525649 (+)
G1530367 NA other downstream 900925 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 1045147 25133210 ~ 25157338 (+)
G1530785 NA other downstream 1462635 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1734670 25838506 ~ 25840353 (+)

Expression


Co-expression Network