G1528760


Basic Information

Item Value
gene id G1528760
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24106210 ~ 24107775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1750314
ggaaacactgccgatttggcaggttatcaaatacttgttctccccactgtatgtgtctgttacttgaactctgtgaagcatttatttgggctgcaatttctgaggctggtaactcgaatgaactctaatcctctgtagcagaggtaactctgggtcttccttccctgtggcggtcctcgtgagagccggtttcatcatagcgcttgatggtttttgcgactgcgcttgTAGGAATGTGAAAGTTATTGACCTTTTCTGGATTGAtgtaccttcatgtcttaaagtagtaatgtactgttgtttctctttgcttatttgagcagttatTCCCATGTTATGGACTTGGTAttgtaccaaatagggctatcttgtgtataccacccctaccttgtcacaagacaactgattggctcaaacatattaagaagaaaagaaattccacaaaataacttttaacaaggcacacctgttaattgaaattaattccaggtgactaccaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1750314 True 502 lncRNA 0.41 2 24106210 24107775

Neighbor

gene id symbol gene type direction distance location
LOC110497102 LOC106574246 coding upstream 5568 24078733 ~ 24100642 (+)
LOC110495871 sumo1 coding upstream 108608 23994022 ~ 23997602 (+)
LOC110495865 LOC106574241 coding upstream 187565 23911979 ~ 23918645 (+)
LOC110495861 LOC106574235 coding upstream 326578 23769548 ~ 23779632 (+)
LOC110495854 LOC106574228 coding upstream 455077 23587611 ~ 23651133 (+)
LOC110495875 LOC106575175 coding downstream 3497 24111272 ~ 24122645 (+)
LOC118941123 LOC106574249 coding downstream 6515 24114290 ~ 24116592 (+)
LOC110495876 LOC106575177 coding downstream 14981 24122756 ~ 24134227 (+)
LOC110495879 LOC106574251 coding downstream 40226 24148001 ~ 24153085 (+)
LOC110495878 LOC106574254 coding downstream 45470 24153245 ~ 24167595 (+)
G1528762 NA non-coding upstream 2374 24103507 ~ 24103836 (+)
G1528763 NA non-coding upstream 19135 24086854 ~ 24087075 (+)
G1528755 NA non-coding upstream 32197 24073803 ~ 24074013 (+)
G1528754 NA non-coding upstream 33097 24072718 ~ 24073113 (+)
G1528752 NA non-coding upstream 35945 24068776 ~ 24070265 (+)
G1528766 NA non-coding downstream 22154 24129929 ~ 24130679 (+)
G1528779 NA non-coding downstream 157747 24265522 ~ 24265839 (+)
G1528789 NA non-coding downstream 171127 24278902 ~ 24279115 (+)
G1528791 NA non-coding downstream 172079 24279854 ~ 24280075 (+)
G1528792 NA non-coding downstream 173586 24281361 ~ 24281731 (+)
G1528194 NA other upstream 944919 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1494758 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3348798 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 3622497 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 3799306 20305705 ~ 20306904 (+)
LOC110495887 LOC108430494 other downstream 412960 24520697 ~ 24525649 (+)
G1530367 NA other downstream 896986 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 1041208 25133210 ~ 25157338 (+)
G1530785 NA other downstream 1458696 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1730731 25838506 ~ 25840353 (+)

Expression


Co-expression Network