Gene
RNA
| Item | Value |
|---|---|
| gene id | G1529493 |
| gene name | LOC106517624 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 24212608 ~ 24213494 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| H(+)/Cl(-) exchange transporter 4 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1751157 | True | 722 | lncRNA | 0.55 | 2 | 24212608 | 24213494 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495883 | LOC106575186 | coding | downstream | 3153 | 24207344 ~ 24209455 (-) |
| LOC110495882 | LOC106574255 | coding | downstream | 36625 | 24167580 ~ 24175983 (-) |
| LOC110495873 | LOC106575174 | coding | downstream | 140249 | 24043236 ~ 24072359 (-) |
| LOC110495872 | LOC106574245 | coding | downstream | 209683 | 23999571 ~ 24002925 (-) |
| LOC110495870 | LOC106574243 | coding | downstream | 221706 | 23974941 ~ 23990902 (-) |
| LOC118941245 | NA | coding | upstream | 12776 | 24226270 ~ 24226399 (-) |
| LOC110497104 | LOC106574262 | coding | upstream | 66653 | 24279738 ~ 24371432 (-) |
| LOC110495886 | LOC106575190 | coding | upstream | 239736 | 24453230 ~ 24465553 (-) |
| LOC110495885 | LOC106575192 | coding | upstream | 264821 | 24478315 ~ 24519903 (-) |
| LOC110495891 | pnpla4 | coding | upstream | 407183 | 24620677 ~ 24629312 (-) |
| G1529453 | NA | non-coding | downstream | 98839 | 24111695 ~ 24113769 (-) |
| G1529451 | NA | non-coding | downstream | 103005 | 24109363 ~ 24109603 (-) |
| G1529449 | NA | non-coding | downstream | 104511 | 24105126 ~ 24108097 (-) |
| G1529438 | NA | non-coding | downstream | 126139 | 24086203 ~ 24086469 (-) |
| G1529437 | NA | non-coding | downstream | 130208 | 24082167 ~ 24082400 (-) |
| G1529494 | LOC106574258 | non-coding | upstream | 2307 | 24215801 ~ 24217224 (-) |
| G1529492 | NA | non-coding | upstream | 4318 | 24217812 ~ 24263095 (-) |
| G1529491 | LOC106575185 | non-coding | upstream | 5369 | 24218863 ~ 24221089 (-) |
| G1529530 | NA | non-coding | upstream | 53828 | 24267322 ~ 24267542 (-) |
| LOC110495852 | LOC106574460 | other | downstream | 669115 | 23542411 ~ 23543631 (-) |
| LOC110495851 | LOC106574449 | other | downstream | 671352 | 23479558 ~ 23541681 (-) |
| LOC110495841 | LOC106574435 | other | downstream | 1044017 | 23008547 ~ 23168591 (-) |
| G1528018 | NA | other | downstream | 1326775 | 22872045 ~ 22885833 (-) |
| G1527230 | NA | other | downstream | 1950146 | 22262056 ~ 22262462 (-) |
| G1529613 | NA | other | upstream | 179881 | 24393375 ~ 24393684 (-) |
| G1530967 | LOC106574270 | other | upstream | 936574 | 25150068 ~ 25150994 (-) |
| G1531142 | NA | other | upstream | 1305927 | 25519421 ~ 25523180 (-) |
| LOC110495915 | NA | other | upstream | 1359944 | 25571910 ~ 25574981 (-) |
