G1529492


Basic Information

Item Value
gene id G1529492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24217812 ~ 24263095 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1751154
TTCGGACAGGGACTGAAGCCGGTTTATTTCAAGTTTAAATTTCAACTAATTCTATCACGGGTGAAAGAAGTGAACAAAACATGAAATATGTACAGTCATAACACACAGAAAATATAACAGACGGCATATAAATATAGGTACGGGAGGGATAAAACAATGACTGAAGCTAAACAGAAGAAGCATGCATTGTAAATGGTTCACAAGGAATAGAACAGCCAAGCCAATATTACATCTGTGGGAAAATACTGCCATTAAACTATTGGCTTTATTTACAGCAGCcttgggatgcatcccaaatggaaccttatgccctatatagggcactacttttgaccgggtcccacaaggctctggtcaaaagtagtgcactgggtagggaatcgggtgccacttgggacataACCTTGGTCTTCGACGCAACACCTTTCCTGTCTAATTCATGATGTATAATACAGCATTTTGAAATAGGGGCAAAAAAACCAACAATTCAAAAGCAGTATTCAGAAGCTATTAGTATGGATTAGTATTGCAGGTATactgtaaaaaaaactaaaacaaggCACAAGCAAATACACACTCAAGATACATGGCTTGAGGATAATAGGGTTTGGTTTTTGATACAGGCCAGTGTGTGCACACAGCATACAATTACAGTATAGTATACAATGTTTGGTCTGTTAAATCAGCCCTAGCTTGGTAGCTGTGATGGATAtccatagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgagagCCAGGGTTAATGTCTTACTGATGGCCACAGTGAGTTCCCTGCGCTGGACGAAGCCGATGAGGCGCTCTGACTCTCGGGACACGACCACAGGGAAGCCGTTGTAGTCGGTGTCCTTGATGAGCGTCTCCACGTCCTCCACTGTGGTGCTGTCCTGGGTCAACACGGCCAGGGGCGGCTCACTGCGCCTGGGACGCATCACATCCGTGGCCAGGGTC

Function

NR:

description
chloride channel 4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1751154 True 992 lncRNA 0.45 2 24217812 24263095

Neighbor

gene id symbol gene type direction distance location
LOC110495883 LOC106575186 coding downstream 8357 24207344 ~ 24209455 (-)
LOC110495882 LOC106574255 coding downstream 41829 24167580 ~ 24175983 (-)
LOC110495873 LOC106575174 coding downstream 145453 24043236 ~ 24072359 (-)
LOC110495872 LOC106574245 coding downstream 214887 23999571 ~ 24002925 (-)
LOC110495870 LOC106574243 coding downstream 226910 23974941 ~ 23990902 (-)
LOC110497104 LOC106574262 coding upstream 17052 24279738 ~ 24371432 (-)
LOC110495886 LOC106575190 coding upstream 190135 24453230 ~ 24465553 (-)
LOC110495885 LOC106575192 coding upstream 215220 24478315 ~ 24519903 (-)
LOC110495891 pnpla4 coding upstream 357582 24620677 ~ 24629312 (-)
LOC110495893 LOC106574268 coding upstream 599878 24785889 ~ 24939922 (-)
G1529494 LOC106574258 non-coding downstream 588 24215801 ~ 24217224 (-)
G1529493 LOC106517624 non-coding downstream 4318 24212608 ~ 24213494 (-)
G1529453 NA non-coding downstream 104043 24111695 ~ 24113769 (-)
G1529451 NA non-coding downstream 108209 24109363 ~ 24109603 (-)
G1529449 NA non-coding downstream 109715 24105126 ~ 24108097 (-)
G1529530 NA non-coding upstream 4227 24267322 ~ 24267542 (-)
G1529542 NA non-coding upstream 23882 24286977 ~ 24287306 (-)
G1529544 NA non-coding upstream 28304 24291399 ~ 24291645 (-)
G1529545 NA non-coding upstream 28917 24292012 ~ 24292241 (-)
LOC110495852 LOC106574460 other downstream 674319 23542411 ~ 23543631 (-)
LOC110495851 LOC106574449 other downstream 676556 23479558 ~ 23541681 (-)
LOC110495841 LOC106574435 other downstream 1049221 23008547 ~ 23168591 (-)
G1528018 NA other downstream 1331979 22872045 ~ 22885833 (-)
G1527230 NA other downstream 1955350 22262056 ~ 22262462 (-)
G1529613 NA other upstream 130280 24393375 ~ 24393684 (-)
G1530967 LOC106574270 other upstream 886973 25150068 ~ 25150994 (-)
G1531142 NA other upstream 1256326 25519421 ~ 25523180 (-)
LOC110495915 NA other upstream 1310343 25571910 ~ 25574981 (-)

Expression


Co-expression Network