G1528779


Basic Information

Item Value
gene id G1528779
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24265522 ~ 24265839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1750337
cacacctactcattcaaaaggttggacacacctactcattcaaaaggttggacacacctactcattcaaaaggttggacacacctactcattcaaaaggttggacacacctactcattcaaaaggttggacacacctactcattcaagggtttttctttaatttgactattttctacattgtacaataatagtgatgacgtcaaaactatgaaataacacatatggaatcatgtagtaaccaaaaaagtgttaaacaaatcaaaatatattttatatttgagaatcttcaaagtagccaccctttgccttgatgacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1750337 True 318 lncRNA 0.35 1 24265522 24265839

Neighbor

gene id symbol gene type direction distance location
LOC110495884 LOC106574260 coding upstream 2416 24222829 ~ 24263106 (+)
LOC100653456 LOC106574258 coding upstream 44423 24210985 ~ 24221099 (+)
LOC110497103 LOC106574257 coding upstream 63908 24199574 ~ 24201614 (+)
shroom2b NA coding upstream 66092 24176311 ~ 24199430 (+)
LOC110495878 LOC106574254 coding upstream 97927 24153245 ~ 24167595 (+)
LOC118941069 NA coding downstream 199699 24465538 ~ 24472111 (+)
LOC110495888 ralbb coding downstream 206260 24472099 ~ 24477037 (+)
LOC110495887 LOC108430494 coding downstream 254858 24520697 ~ 24525649 (+)
LOC110495890 LOC106574267 coding downstream 290398 24556237 ~ 24574771 (+)
LOC110495892 sts coding downstream 348404 24614243 ~ 24626367 (+)
G1528766 NA non-coding upstream 134843 24129929 ~ 24130679 (+)
G1528760 NA non-coding upstream 157747 24106210 ~ 24107775 (+)
G1528762 NA non-coding upstream 161686 24103507 ~ 24103836 (+)
G1528763 NA non-coding upstream 178447 24086854 ~ 24087075 (+)
G1528755 NA non-coding upstream 191509 24073803 ~ 24074013 (+)
G1528789 NA non-coding downstream 13063 24278902 ~ 24279115 (+)
G1528791 NA non-coding downstream 14015 24279854 ~ 24280075 (+)
G1528792 NA non-coding downstream 15522 24281361 ~ 24281731 (+)
G1528794 LOC106574262 non-coding downstream 20801 24286640 ~ 24286937 (+)
G1528795 NA non-coding downstream 23308 24289147 ~ 24289487 (+)
G1528194 NA other upstream 1104231 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1654070 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3508110 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 3781809 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 3958618 20305705 ~ 20306904 (+)
G1530367 NA other downstream 738922 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 883144 25133210 ~ 25157338 (+)
G1530785 NA other downstream 1300632 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1572667 25838506 ~ 25840353 (+)

Expression


Co-expression Network