Gene
RNA
| Item | Value |
|---|---|
| gene id | G1528789 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 24278902 ~ 24279115 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1750347 | True | 214 | lncRNA | 0.49 | 1 | 24278902 | 24279115 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495884 | LOC106574260 | coding | upstream | 15796 | 24222829 ~ 24263106 (+) |
| LOC100653456 | LOC106574258 | coding | upstream | 57803 | 24210985 ~ 24221099 (+) |
| LOC110497103 | LOC106574257 | coding | upstream | 77288 | 24199574 ~ 24201614 (+) |
| shroom2b | NA | coding | upstream | 79472 | 24176311 ~ 24199430 (+) |
| LOC110495878 | LOC106574254 | coding | upstream | 111307 | 24153245 ~ 24167595 (+) |
| LOC118941069 | NA | coding | downstream | 186423 | 24465538 ~ 24472111 (+) |
| LOC110495888 | ralbb | coding | downstream | 192984 | 24472099 ~ 24477037 (+) |
| LOC110495887 | LOC108430494 | coding | downstream | 241582 | 24520697 ~ 24525649 (+) |
| LOC110495890 | LOC106574267 | coding | downstream | 277122 | 24556237 ~ 24574771 (+) |
| LOC110495892 | sts | coding | downstream | 335128 | 24614243 ~ 24626367 (+) |
| G1528779 | NA | non-coding | upstream | 13063 | 24265522 ~ 24265839 (+) |
| G1528766 | NA | non-coding | upstream | 148223 | 24129929 ~ 24130679 (+) |
| G1528760 | NA | non-coding | upstream | 171127 | 24106210 ~ 24107775 (+) |
| G1528762 | NA | non-coding | upstream | 175066 | 24103507 ~ 24103836 (+) |
| G1528763 | NA | non-coding | upstream | 191827 | 24086854 ~ 24087075 (+) |
| G1528791 | NA | non-coding | downstream | 739 | 24279854 ~ 24280075 (+) |
| G1528792 | NA | non-coding | downstream | 2246 | 24281361 ~ 24281731 (+) |
| G1528794 | LOC106574262 | non-coding | downstream | 7525 | 24286640 ~ 24286937 (+) |
| G1528795 | NA | non-coding | downstream | 10032 | 24289147 ~ 24289487 (+) |
| G1528798 | NA | non-coding | downstream | 13505 | 24292620 ~ 24292846 (+) |
| G1528194 | NA | other | upstream | 1117611 | 23158833 ~ 23161291 (+) |
| LOC110497098 | LOC106574424 | other | upstream | 1667450 | 22599016 ~ 22641368 (+) |
| G1525320 | NA | other | upstream | 3521490 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 3795189 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 3971998 | 20305705 ~ 20306904 (+) |
| G1530367 | NA | other | downstream | 725646 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 869868 | 25133210 ~ 25157338 (+) |
| G1530785 | NA | other | downstream | 1287356 | 25566471 ~ 25571346 (+) |
| G1530923 | LOC106574292 | other | downstream | 1559391 | 25838506 ~ 25840353 (+) |
