G1528799


Basic Information

Item Value
gene id G1528799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24293175 ~ 24293439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1750357
tcccagccttgtgcaggtatacaattttatccctgatgtccttacaaagctctctagtcttggccattgtggagaggttggagtctgtgattgagtgtgtggacaggtgtcttttatacaggtaacgagttcaaacaggtgcagttaatacaggtaatgagtgtaGAACAGGagagcttcttaaagaaaaactaacaggtctgtgagagccagaattcttactggttggtaggtgatcaaatacttatgtcttgcaataaaatgc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1750357 True 265 lncRNA 0.42 1 24293175 24293439

Neighbor

gene id symbol gene type direction distance location
LOC110495884 LOC106574260 coding upstream 30069 24222829 ~ 24263106 (+)
LOC100653456 LOC106574258 coding upstream 72076 24210985 ~ 24221099 (+)
LOC110497103 LOC106574257 coding upstream 91561 24199574 ~ 24201614 (+)
shroom2b NA coding upstream 93745 24176311 ~ 24199430 (+)
LOC110495878 LOC106574254 coding upstream 125580 24153245 ~ 24167595 (+)
LOC118941069 NA coding downstream 172099 24465538 ~ 24472111 (+)
LOC110495888 ralbb coding downstream 178660 24472099 ~ 24477037 (+)
LOC110495887 LOC108430494 coding downstream 227258 24520697 ~ 24525649 (+)
LOC110495890 LOC106574267 coding downstream 262798 24556237 ~ 24574771 (+)
LOC110495892 sts coding downstream 320804 24614243 ~ 24626367 (+)
G1528798 NA non-coding upstream 329 24292620 ~ 24292846 (+)
G1528795 NA non-coding upstream 3688 24289147 ~ 24289487 (+)
G1528794 LOC106574262 non-coding upstream 6238 24286640 ~ 24286937 (+)
G1528792 NA non-coding upstream 11444 24281361 ~ 24281731 (+)
G1528791 NA non-coding upstream 13100 24279854 ~ 24280075 (+)
G1528802 NA non-coding downstream 2673 24296112 ~ 24296424 (+)
G1528803 NA non-coding downstream 7453 24300892 ~ 24301438 (+)
G1528805 NA non-coding downstream 10349 24303788 ~ 24304129 (+)
G1528808 LOC104945625 non-coding downstream 12822 24306261 ~ 24306608 (+)
G1528818 NA non-coding downstream 36848 24330287 ~ 24330521 (+)
G1528194 NA other upstream 1131884 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1681723 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3535763 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 3809462 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 3986271 20305705 ~ 20306904 (+)
G1530367 NA other downstream 711322 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 855544 25133210 ~ 25157338 (+)
G1530785 NA other downstream 1273032 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1545067 25838506 ~ 25840353 (+)

Expression


Co-expression Network