G1529561


Basic Information

Item Value
gene id G1529561
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24318831 ~ 24319223 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1751231
TGTAATATCTATGCTACACAGAGAAACAATGGACCTTAACTACCAAAAAAGTTGAAGCAAGACCACAGCCACTTTGGCTCATACAGCTTCTCCACCACTGAAATCATAGTGAAGTTAAACCCAGCACAGATAAAtacattcctctgtctctcatagggAAGTTAAACCCAGCACAGATAgatacatccctctgtctctcatagggAAGTTAAACCCAGCACAGATAgatacatccctctgtctctcatagggAAGTTAAACCCAGCACAGATAgatacatccctctgtctctcatagggAAGTTAAACCCAGCACAGATAgatacatccctctgtctctcatagggAAGTTAAACCCAGCACAGATAgatacatccctctgtctctcataggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1751231 True 393 lncRNA 0.43 1 24318831 24319223

Neighbor

gene id symbol gene type direction distance location
LOC118941245 NA coding downstream 92432 24226270 ~ 24226399 (-)
LOC110495883 LOC106575186 coding downstream 109376 24207344 ~ 24209455 (-)
LOC110495882 LOC106574255 coding downstream 142848 24167580 ~ 24175983 (-)
LOC110495873 LOC106575174 coding downstream 246472 24043236 ~ 24072359 (-)
LOC110495872 LOC106574245 coding downstream 315906 23999571 ~ 24002925 (-)
LOC110495886 LOC106575190 coding upstream 134007 24453230 ~ 24465553 (-)
LOC110495885 LOC106575192 coding upstream 159092 24478315 ~ 24519903 (-)
LOC110495891 pnpla4 coding upstream 301454 24620677 ~ 24629312 (-)
LOC110495893 LOC106574268 coding upstream 543750 24785889 ~ 24939922 (-)
LOC110496921 hdd1a coding upstream 668518 24987741 ~ 25004133 (-)
G1529549 NA non-coding downstream 22519 24296080 ~ 24296312 (-)
G1529545 NA non-coding downstream 26590 24292012 ~ 24292241 (-)
G1529544 NA non-coding downstream 27186 24291399 ~ 24291645 (-)
G1529542 NA non-coding downstream 31525 24286977 ~ 24287306 (-)
LOC110497104 LOC106574262 non-coding downstream 36882 24279738 ~ 24371432 (-)
G1529564 NA non-coding upstream 5501 24324724 ~ 24324959 (-)
G1529577 NA non-coding upstream 35866 24355089 ~ 24355598 (-)
G1529618 NA non-coding upstream 77412 24396635 ~ 24396872 (-)
G1529620 NA non-coding upstream 78015 24397238 ~ 24397475 (-)
G1529621 NA non-coding upstream 78314 24397537 ~ 24397744 (-)
LOC110495852 LOC106574460 other downstream 775338 23542411 ~ 23543631 (-)
LOC110495851 LOC106574449 other downstream 777575 23479558 ~ 23541681 (-)
LOC110495841 LOC106574435 other downstream 1150240 23008547 ~ 23168591 (-)
G1528018 NA other downstream 1432998 22872045 ~ 22885833 (-)
G1529613 NA other upstream 74152 24393375 ~ 24393684 (-)
G1530967 LOC106574270 other upstream 830845 25150068 ~ 25150994 (-)
G1531142 NA other upstream 1200198 25519421 ~ 25523180 (-)
LOC110495915 NA other upstream 1254215 25571910 ~ 25574981 (-)
G1531236 NA other upstream 1377316 25696539 ~ 25708874 (-)

Expression


Co-expression Network