G1528835



Basic Information


Item Value
gene id G1528835
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24368294 ~ 24368502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1750393
CCTTTGTCTGAGCCAAAGCTGTAGAAACAGCCAAGCTGGATAACTGTAGAATACCATTTACACAAAGGTGAAAATTAATGGTATTAAAACTGACAGTTTCAAACTTTGCGGTCAGAGTTTTCCCTCTGAAACAGAGGAAAGCATAGTTTACACAACCTGACAAAATCGACTCACTTCACATGATGCAATCCATAAGGACTGTGCCATAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1750393 True 209 lncRNA 0.39 1 24368294 24368502

Neighbor


gene id symbol gene type direction distance location
LOC110495884 LOC106574260 coding upstream 105188 24222829 ~ 24263106 (+)
LOC100653456 LOC106574258 coding upstream 147195 24210985 ~ 24221099 (+)
LOC110497103 LOC106574257 coding upstream 166680 24199574 ~ 24201614 (+)
shroom2b NA coding upstream 168864 24176311 ~ 24199430 (+)
LOC110495878 LOC106574254 coding upstream 200699 24153245 ~ 24167595 (+)
LOC118941069 NA coding downstream 97036 24465538 ~ 24472111 (+)
LOC110495888 ralbb coding downstream 103597 24472099 ~ 24477037 (+)
LOC110495887 LOC108430494 coding downstream 152195 24520697 ~ 24525649 (+)
LOC110495890 LOC106574267 coding downstream 187735 24556237 ~ 24574771 (+)
LOC110495892 sts coding downstream 245741 24614243 ~ 24626367 (+)
G1528833 NA non-coding upstream 2764 24365257 ~ 24365530 (+)
G1528829 NA non-coding upstream 10873 24357217 ~ 24357421 (+)
G1528818 NA non-coding upstream 37773 24330287 ~ 24330521 (+)
G1528808 LOC104945625 non-coding upstream 61686 24306261 ~ 24306608 (+)
G1528805 NA non-coding upstream 64165 24303788 ~ 24304129 (+)
G1529593 NA non-coding downstream 8614 24377116 ~ 24377335 (+)
G1529596 NA non-coding downstream 9217 24377719 ~ 24377943 (+)
G1529598 NA non-coding downstream 11947 24380449 ~ 24380668 (+)
G1529612 NA non-coding downstream 23901 24392403 ~ 24392646 (+)
G1529657 LOC106574263 non-coding downstream 95573 24464075 ~ 24464540 (+)
G1528194 NA other upstream 1207003 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1756842 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3610882 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 3884581 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 4061390 20305705 ~ 20306904 (+)
G1530367 NA other downstream 636259 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 780481 25133210 ~ 25157338 (+)
G1530785 NA other downstream 1197969 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1470004 25838506 ~ 25840353 (+)

Expression



Co-expression Network