G1529593


Basic Information

Item Value
gene id G1529593
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24377116 ~ 24377335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1751263
aaatacagtggggcaaaaatgtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagatgattttctggatttttttcctcattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacctttttgccccactgtatatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1751263 True 220 lncRNA 0.37 1 24377116 24377335

Neighbor

gene id symbol gene type direction distance location
LOC110495884 LOC106574260 coding upstream 114010 24222829 ~ 24263106 (+)
LOC100653456 LOC106574258 coding upstream 156017 24210985 ~ 24221099 (+)
LOC110497103 LOC106574257 coding upstream 175502 24199574 ~ 24201614 (+)
shroom2b NA coding upstream 177686 24176311 ~ 24199430 (+)
LOC110495878 LOC106574254 coding upstream 209521 24153245 ~ 24167595 (+)
LOC118941069 NA coding downstream 88203 24465538 ~ 24472111 (+)
LOC110495888 ralbb coding downstream 94764 24472099 ~ 24477037 (+)
LOC110495887 LOC108430494 coding downstream 143362 24520697 ~ 24525649 (+)
LOC110495890 LOC106574267 coding downstream 178902 24556237 ~ 24574771 (+)
LOC110495892 sts coding downstream 236908 24614243 ~ 24626367 (+)
G1528835 NA non-coding upstream 8614 24368294 ~ 24368502 (+)
G1528833 NA non-coding upstream 11586 24365257 ~ 24365530 (+)
G1528829 NA non-coding upstream 19695 24357217 ~ 24357421 (+)
G1528818 NA non-coding upstream 46595 24330287 ~ 24330521 (+)
G1528808 LOC104945625 non-coding upstream 70508 24306261 ~ 24306608 (+)
G1529596 NA non-coding downstream 384 24377719 ~ 24377943 (+)
G1529598 NA non-coding downstream 3114 24380449 ~ 24380668 (+)
G1529612 NA non-coding downstream 15068 24392403 ~ 24392646 (+)
G1529657 LOC106574263 non-coding downstream 86740 24464075 ~ 24464540 (+)
G1528194 NA other upstream 1215825 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1765664 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3619704 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 3893403 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 4070212 20305705 ~ 20306904 (+)
G1530367 NA other downstream 627426 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 771648 25133210 ~ 25157338 (+)
G1530785 NA other downstream 1189136 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1461171 25838506 ~ 25840353 (+)

Expression


Co-expression Network