Gene
RNA
| Item | Value |
|---|---|
| gene id | G1529596 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 24377719 ~ 24377943 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1751266 | True | 225 | lncRNA | 0.50 | 1 | 24377719 | 24377943 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495884 | LOC106574260 | coding | upstream | 114613 | 24222829 ~ 24263106 (+) |
| LOC100653456 | LOC106574258 | coding | upstream | 156620 | 24210985 ~ 24221099 (+) |
| LOC110497103 | LOC106574257 | coding | upstream | 176105 | 24199574 ~ 24201614 (+) |
| shroom2b | NA | coding | upstream | 178289 | 24176311 ~ 24199430 (+) |
| LOC110495878 | LOC106574254 | coding | upstream | 210124 | 24153245 ~ 24167595 (+) |
| LOC118941069 | NA | coding | downstream | 87595 | 24465538 ~ 24472111 (+) |
| LOC110495888 | ralbb | coding | downstream | 94156 | 24472099 ~ 24477037 (+) |
| LOC110495887 | LOC108430494 | coding | downstream | 142754 | 24520697 ~ 24525649 (+) |
| LOC110495890 | LOC106574267 | coding | downstream | 178294 | 24556237 ~ 24574771 (+) |
| LOC110495892 | sts | coding | downstream | 236300 | 24614243 ~ 24626367 (+) |
| G1529593 | NA | non-coding | upstream | 384 | 24377116 ~ 24377335 (+) |
| G1528835 | NA | non-coding | upstream | 9217 | 24368294 ~ 24368502 (+) |
| G1528833 | NA | non-coding | upstream | 12189 | 24365257 ~ 24365530 (+) |
| G1528829 | NA | non-coding | upstream | 20298 | 24357217 ~ 24357421 (+) |
| G1528818 | NA | non-coding | upstream | 47198 | 24330287 ~ 24330521 (+) |
| G1529598 | NA | non-coding | downstream | 2506 | 24380449 ~ 24380668 (+) |
| G1529612 | NA | non-coding | downstream | 14460 | 24392403 ~ 24392646 (+) |
| G1529657 | LOC106574263 | non-coding | downstream | 86132 | 24464075 ~ 24464540 (+) |
| G1528194 | NA | other | upstream | 1216428 | 23158833 ~ 23161291 (+) |
| LOC110497098 | LOC106574424 | other | upstream | 1766267 | 22599016 ~ 22641368 (+) |
| G1525320 | NA | other | upstream | 3620307 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 3894006 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 4070815 | 20305705 ~ 20306904 (+) |
| G1530367 | NA | other | downstream | 626818 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 771040 | 25133210 ~ 25157338 (+) |
| G1530785 | NA | other | downstream | 1188528 | 25566471 ~ 25571346 (+) |
| G1530923 | LOC106574292 | other | downstream | 1460563 | 25838506 ~ 25840353 (+) |
