G1529657 (LOC106574263)


Basic Information

Item Value
gene id G1529657
gene name LOC106574263
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24464075 ~ 24464540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1751329
TACATCACCTTGGTCTAATGTTTAGTCCAAACCTTAGGCACCATACCCAGCTTGGTCTTTGCGTAAAAGTGGTTTTATTTGTTCATTTTTTTCCTAATACAATAGAGTAAACGGTAGCTTGCCTGTAATATACAATAATTACACACCTGTCTCTGCGAAACTGATTATCTCCGAGCTTTCCTCCAGCACGTCATTGGCATTGCTGGTCGCGTGTCCATCCAGATTCGGGATTTCTACTCTCCCATCCTCGCGCACTTTACCCGCGTGTAGTTTCCGAAGCGCAGTCACCATCGCCGCCTTCGGGATAGGATGGGTGATGTTGGGTCTTACCCTCATCTGTAACCTGCTCAAGATATGCCTTTTCACCGTCTCCAGAAAGTCAATGTCCACCTGTCCCGATTCTTCGGGCTGACCGATGCCACACGAAGAGCAAGCTTCCTGAGCTACGGTTTGCGTCTCCATTCCC

Function

NR:

description
inhibin beta B chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1751329 True 466 lncRNA 0.48 1 24464075 24464540

Neighbor

gene id symbol gene type direction distance location
LOC110495884 LOC106574260 coding upstream 200969 24222829 ~ 24263106 (+)
LOC100653456 LOC106574258 coding upstream 242976 24210985 ~ 24221099 (+)
LOC110497103 LOC106574257 coding upstream 262461 24199574 ~ 24201614 (+)
shroom2b NA coding upstream 264645 24176311 ~ 24199430 (+)
LOC110495878 LOC106574254 coding upstream 296480 24153245 ~ 24167595 (+)
LOC118941069 NA coding downstream 998 24465538 ~ 24472111 (+)
LOC110495888 ralbb coding downstream 7559 24472099 ~ 24477037 (+)
LOC110495887 LOC108430494 coding downstream 56157 24520697 ~ 24525649 (+)
LOC110495890 LOC106574267 coding downstream 91697 24556237 ~ 24574771 (+)
LOC110495892 sts coding downstream 149703 24614243 ~ 24626367 (+)
G1529612 NA non-coding upstream 71429 24392403 ~ 24392646 (+)
G1529598 NA non-coding upstream 83407 24380449 ~ 24380668 (+)
G1529596 NA non-coding upstream 86132 24377719 ~ 24377943 (+)
G1529593 NA non-coding upstream 86740 24377116 ~ 24377335 (+)
G1528835 NA non-coding upstream 95573 24368294 ~ 24368502 (+)
G1529700 NA non-coding downstream 74389 24538929 ~ 24539269 (+)
G1529693 NA non-coding downstream 76323 24540863 ~ 24541985 (+)
G1529960 NA non-coding downstream 240906 24705446 ~ 24705846 (+)
G1528194 NA other upstream 1302784 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1852623 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3706663 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 3980362 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 4157171 20305705 ~ 20306904 (+)
G1530367 NA other downstream 540221 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 684443 25133210 ~ 25157338 (+)
G1530785 NA other downstream 1101931 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1373966 25838506 ~ 25840353 (+)

Expression


Co-expression Network