G1529700


Basic Information

Item Value
gene id G1529700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24538929 ~ 24539269 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1751384
gttcggggtacgcttgcttccattcgccagcgtttttggtggcccacccgggagcatgacacgcgtcgtttcgtggctgcttgttcggtctgcgcgcagactaagtccggtaactctcctcctgccggccgtctcaggccgcgtcctattccctctcgaccgtggtctcacatcgccttagattttgtcaccggactgccttcgtcagcggggaagactgttattcttacggttgtcgataggttctctaaggcggctcatttcattccccttgctaagcttccttctgctaaagagacggcacaaatcatcatcgagaatgttttcagaattcatggcct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1751384 True 341 lncRNA 0.55 1 24538929 24539269

Neighbor

gene id symbol gene type direction distance location
LOC110495887 LOC108430494 coding upstream 13280 24520697 ~ 24525649 (+)
LOC110495888 ralbb coding upstream 61892 24472099 ~ 24477037 (+)
LOC118941069 NA coding upstream 66818 24465538 ~ 24472111 (+)
LOC110495884 LOC106574260 coding upstream 275823 24222829 ~ 24263106 (+)
LOC100653456 LOC106574258 coding upstream 317830 24210985 ~ 24221099 (+)
LOC110495890 LOC106574267 coding downstream 16968 24556237 ~ 24574771 (+)
LOC110495892 sts coding downstream 74974 24614243 ~ 24626367 (+)
LOC110495894 LOC106574269 coding downstream 536431 25075700 ~ 25097350 (+)
LOC110495895 LOC106574270 coding downstream 593941 25133210 ~ 25157338 (+)
dhrsx LOC106574274 coding downstream 657975 25197244 ~ 25229821 (+)
G1529657 LOC106574263 non-coding upstream 74389 24464075 ~ 24464540 (+)
G1529612 NA non-coding upstream 146283 24392403 ~ 24392646 (+)
G1529598 NA non-coding upstream 158261 24380449 ~ 24380668 (+)
G1529693 NA non-coding downstream 1594 24540863 ~ 24541985 (+)
G1529960 NA non-coding downstream 166177 24705446 ~ 24705846 (+)
G1530012 NA non-coding downstream 212387 24751656 ~ 24751945 (+)
G1530013 NA non-coding downstream 212828 24752097 ~ 24752296 (+)
G1530017 NA non-coding downstream 216943 24756212 ~ 24756490 (+)
G1528194 NA other upstream 1377638 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1927477 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3781517 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 4055216 20473360 ~ 20483713 (+)
G1530367 NA other downstream 465492 25004761 ~ 25005609 (+)
G1530785 NA other downstream 1027202 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1299237 25838506 ~ 25840353 (+)
LOC110496782 LOC106575224 other downstream 1394911 25930184 ~ 25943678 (+)

Expression


Co-expression Network