G1530017


Basic Information

Item Value
gene id G1530017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24756212 ~ 24756490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1751732
gcacaaaatagtccaaattggtgaagtgaaatttaaaaaattgcTTAAAAAATGGGAATgtggtattcaccccctttgctatgaagcccctaaataagatctggtgcaaccaattaccttcagaagtcacataattagttaaataaagtgcacctgtgtgcgatctaagtgtcacatgatctgtcacatgatctcagtatatatacacctgttctgaaaggccccaaagTCTGCAACACCATCAATGCAAGGGACActaccaagcaagcggcactatga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1751732 True 279 lncRNA 0.40 1 24756212 24756490

Neighbor

gene id symbol gene type direction distance location
LOC110495892 sts coding upstream 129845 24614243 ~ 24626367 (+)
LOC110495890 LOC106574267 coding upstream 181441 24556237 ~ 24574771 (+)
LOC110495887 LOC108430494 coding upstream 230563 24520697 ~ 24525649 (+)
LOC110495888 ralbb coding upstream 279175 24472099 ~ 24477037 (+)
LOC118941069 NA coding upstream 284101 24465538 ~ 24472111 (+)
LOC110495894 LOC106574269 coding downstream 319210 25075700 ~ 25097350 (+)
LOC110495895 LOC106574270 coding downstream 376720 25133210 ~ 25157338 (+)
dhrsx LOC106574274 coding downstream 440754 25197244 ~ 25229821 (+)
LOC110495899 zbed1 coding downstream 448093 25204583 ~ 25208443 (+)
LOC110495902 LOC106574278 coding downstream 507505 25263995 ~ 25272511 (+)
G1530013 NA non-coding upstream 3916 24752097 ~ 24752296 (+)
G1530012 NA non-coding upstream 4267 24751656 ~ 24751945 (+)
G1529960 NA non-coding upstream 50366 24705446 ~ 24705846 (+)
G1529693 NA non-coding upstream 214227 24540863 ~ 24541985 (+)
G1529700 NA non-coding upstream 216943 24538929 ~ 24539269 (+)
G1530031 NA non-coding downstream 5318 24761808 ~ 24762063 (+)
G1530153 NA non-coding downstream 170665 24927155 ~ 24999214 (+)
G1530175 NA non-coding downstream 199360 24955850 ~ 24956259 (+)
G1530360 LOC100194703 non-coding downstream 244499 25000989 ~ 25001207 (+)
G1530374 NA non-coding downstream 252458 25008948 ~ 25009211 (+)
G1528194 NA other upstream 1594921 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 2144760 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3998800 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 4272499 20473360 ~ 20483713 (+)
G1530367 NA other downstream 248271 25004761 ~ 25005609 (+)
G1530785 NA other downstream 809981 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1082016 25838506 ~ 25840353 (+)
LOC110496782 LOC106575224 other downstream 1177690 25930184 ~ 25943678 (+)

Expression


Co-expression Network