G1530360 (LOC100194703)


Basic Information

Item Value
gene id G1530360
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 25000989 ~ 25001207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1752085
atatcagtctgtccctgatgtttttcctggagagaagtagcttctttgctgcccttcttgacaccaggccatcctccaaaagtcttcgcctcactgtgcgtgcagatgcactcacacctgcctgctgccattcctgagcaagctctgtactggtggtgccccgatcccgcagctgaatcaactttaggagacggtcctggcgcttgctggactttcttg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1752085 True 219 lncRNA 0.54 1 25000989 25001207

Neighbor

gene id symbol gene type direction distance location
LOC110495892 sts coding upstream 374622 24614243 ~ 24626367 (+)
LOC110495890 LOC106574267 coding upstream 426218 24556237 ~ 24574771 (+)
LOC110495887 LOC108430494 coding upstream 475340 24520697 ~ 24525649 (+)
LOC110495888 ralbb coding upstream 523952 24472099 ~ 24477037 (+)
LOC118941069 NA coding upstream 528878 24465538 ~ 24472111 (+)
LOC110495894 LOC106574269 coding downstream 74493 25075700 ~ 25097350 (+)
LOC110495895 LOC106574270 coding downstream 132003 25133210 ~ 25157338 (+)
dhrsx LOC106574274 coding downstream 196037 25197244 ~ 25229821 (+)
LOC110495899 zbed1 coding downstream 203376 25204583 ~ 25208443 (+)
LOC110495902 LOC106574278 coding downstream 262788 25263995 ~ 25272511 (+)
G1530153 NA non-coding upstream 1775 24927155 ~ 24999214 (+)
G1530175 NA non-coding upstream 44730 24955850 ~ 24956259 (+)
G1530031 NA non-coding upstream 238926 24761808 ~ 24762063 (+)
G1530017 NA non-coding upstream 244499 24756212 ~ 24756490 (+)
G1530013 NA non-coding upstream 248693 24752097 ~ 24752296 (+)
G1530374 NA non-coding downstream 7741 25008948 ~ 25009211 (+)
G1530375 NA non-coding downstream 8021 25009228 ~ 25009462 (+)
G1530392 NA non-coding downstream 19652 25020859 ~ 25021156 (+)
G1530439 NA non-coding downstream 72519 25073726 ~ 25073939 (+)
G1528194 NA other upstream 1839698 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 2389537 22599016 ~ 22641368 (+)
G1525320 NA other upstream 4243577 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 4517276 20473360 ~ 20483713 (+)
G1530367 NA other downstream 3554 25004761 ~ 25005609 (+)
G1530785 NA other downstream 565264 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 837299 25838506 ~ 25840353 (+)
LOC110496782 LOC106575224 other downstream 932973 25930184 ~ 25943678 (+)

Expression


Co-expression Network