G1530375


Basic Information

Item Value
gene id G1530375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 25009228 ~ 25009462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1752100
cagtctccagacctgaacccaatagaaaacctttggagggagctgaaagtccgtattgcccagcgacagccccgaaacctgaaggatctggagaaggtctgtatggaggagtgggccaaaatccctgctgcagtgtgtgcaaacctggtcaagaactacaggaaacgtatgatctctgtaattgcaaacaaaggtttctgtaccaaatattaagttctgcttttctgatgtatca

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1752100 True 235 lncRNA 0.46 1 25009228 25009462

Neighbor

gene id symbol gene type direction distance location
LOC110495892 sts coding upstream 382861 24614243 ~ 24626367 (+)
LOC110495890 LOC106574267 coding upstream 434457 24556237 ~ 24574771 (+)
LOC110495887 LOC108430494 coding upstream 483579 24520697 ~ 24525649 (+)
LOC110495888 ralbb coding upstream 532191 24472099 ~ 24477037 (+)
LOC118941069 NA coding upstream 537117 24465538 ~ 24472111 (+)
LOC110495894 LOC106574269 coding downstream 66238 25075700 ~ 25097350 (+)
LOC110495895 LOC106574270 coding downstream 123748 25133210 ~ 25157338 (+)
dhrsx LOC106574274 coding downstream 187782 25197244 ~ 25229821 (+)
LOC110495899 zbed1 coding downstream 195121 25204583 ~ 25208443 (+)
LOC110495902 LOC106574278 coding downstream 254533 25263995 ~ 25272511 (+)
G1530374 NA non-coding upstream 17 25008948 ~ 25009211 (+)
G1530360 LOC100194703 non-coding upstream 8021 25000989 ~ 25001207 (+)
G1530153 NA non-coding upstream 10014 24927155 ~ 24999214 (+)
G1530175 NA non-coding upstream 52969 24955850 ~ 24956259 (+)
G1530031 NA non-coding upstream 247165 24761808 ~ 24762063 (+)
G1530392 NA non-coding downstream 11397 25020859 ~ 25021156 (+)
G1530439 NA non-coding downstream 64264 25073726 ~ 25073939 (+)
G1530573 LOC105030512 non-coding downstream 129929 25139391 ~ 25139723 (+)
G1530575 NA non-coding downstream 133456 25142918 ~ 25143118 (+)
G1530367 NA other upstream 3619 25004761 ~ 25005609 (+)
G1528194 NA other upstream 1847937 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 2397776 22599016 ~ 22641368 (+)
G1525320 NA other upstream 4251816 20756691 ~ 20757412 (+)
G1530785 NA other downstream 557009 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 829044 25838506 ~ 25840353 (+)
LOC110496782 LOC106575224 other downstream 924718 25930184 ~ 25943678 (+)
G1532307 NA other downstream 1747907 26757369 ~ 26757677 (+)

Expression


Co-expression Network