G1530575


Basic Information

Item Value
gene id G1530575
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 25142918 ~ 25143118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1752305
catttaggcaggttaccttcgcttctttgggcatagggactatggtggtctgcttgaaacatgtaggtattacagactcggtcaaggaaaggttgaaaatgtcagtgaagacacttgacagttgagccgcgcatgctttgagtacacgtcctggtaatccatctggcccagcggctttgtgaatgttgacctgttttaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1752305 True 201 lncRNA 0.47 1 25142918 25143118

Neighbor

gene id symbol gene type direction distance location
LOC110495894 LOC106574269 coding upstream 45568 25075700 ~ 25097350 (+)
LOC110495892 sts coding upstream 516551 24614243 ~ 24626367 (+)
LOC110495890 LOC106574267 coding upstream 568147 24556237 ~ 24574771 (+)
LOC110495887 LOC108430494 coding upstream 617269 24520697 ~ 24525649 (+)
LOC110495888 ralbb coding upstream 665881 24472099 ~ 24477037 (+)
dhrsx LOC106574274 coding downstream 54126 25197244 ~ 25229821 (+)
LOC110495899 zbed1 coding downstream 61465 25204583 ~ 25208443 (+)
LOC110495902 LOC106574278 coding downstream 120877 25263995 ~ 25272511 (+)
LOC110495908 ftcd coding downstream 254808 25397926 ~ 25403564 (+)
LOC110495909 LOC106574290 coding downstream 262495 25405613 ~ 25407437 (+)
G1530573 LOC105030512 non-coding upstream 3195 25139391 ~ 25139723 (+)
G1530439 NA non-coding upstream 68979 25073726 ~ 25073939 (+)
G1530392 NA non-coding upstream 121762 25020859 ~ 25021156 (+)
G1530375 NA non-coding upstream 133456 25009228 ~ 25009462 (+)
LOC110495895 LOC106574270 non-coding downstream 4014 25133210 ~ 25157338 (+)
G1530578 NA non-coding downstream 15955 25159073 ~ 25159277 (+)
G1530582 NA non-coding downstream 22009 25165127 ~ 25165416 (+)
G1530587 NA non-coding downstream 30235 25173353 ~ 25173564 (+)
G1530590 NA non-coding downstream 34322 25177440 ~ 25177873 (+)
G1530367 NA other upstream 137309 25004761 ~ 25005609 (+)
G1528194 NA other upstream 1981627 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 2531466 22599016 ~ 22641368 (+)
G1525320 NA other upstream 4385506 20756691 ~ 20757412 (+)
G1530785 NA other downstream 423353 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 695388 25838506 ~ 25840353 (+)
LOC110496782 LOC106575224 other downstream 791062 25930184 ~ 25943678 (+)
G1532307 NA other downstream 1614251 26757369 ~ 26757677 (+)

Expression


Co-expression Network