Gene
RNA
| Item | Value |
|---|---|
| gene id | G1530627 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 25255237 ~ 25255779 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1752360 | True | 543 | lncRNA | 0.44 | 1 | 25255237 | 25255779 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dhrsx | LOC106574274 | coding | upstream | 25416 | 25197244 ~ 25229821 (+) |
| LOC110495899 | zbed1 | coding | upstream | 46794 | 25204583 ~ 25208443 (+) |
| LOC110495895 | LOC106574270 | coding | upstream | 97899 | 25133210 ~ 25157338 (+) |
| LOC110495894 | LOC106574269 | coding | upstream | 157887 | 25075700 ~ 25097350 (+) |
| LOC110495892 | sts | coding | upstream | 628870 | 24614243 ~ 24626367 (+) |
| LOC110495902 | LOC106574278 | coding | downstream | 8216 | 25263995 ~ 25272511 (+) |
| LOC110495908 | ftcd | coding | downstream | 142147 | 25397926 ~ 25403564 (+) |
| LOC110495909 | LOC106574290 | coding | downstream | 149834 | 25405613 ~ 25407437 (+) |
| sh3bp4a | LOC106574293 | coding | downstream | 603217 | 25858996 ~ 25884157 (+) |
| arl4ca | LOC106574375 | coding | downstream | 637538 | 25893317 ~ 25896446 (+) |
| G1530626 | NA | non-coding | upstream | 105 | 25254892 ~ 25255132 (+) |
| G1530591 | NA | non-coding | upstream | 76193 | 25178682 ~ 25179044 (+) |
| G1530590 | NA | non-coding | upstream | 77364 | 25177440 ~ 25177873 (+) |
| G1530587 | NA | non-coding | upstream | 81673 | 25173353 ~ 25173564 (+) |
| G1530582 | NA | non-coding | upstream | 89821 | 25165127 ~ 25165416 (+) |
| G1530628 | NA | non-coding | downstream | 588 | 25256367 ~ 25256594 (+) |
| G1530569 | LOC106574277 | non-coding | downstream | 5247 | 25261026 ~ 25263032 (+) |
| G1530662 | LOC106574282 | non-coding | downstream | 76213 | 25331992 ~ 25393264 (+) |
| G1530712 | NA | non-coding | downstream | 140948 | 25396727 ~ 25396949 (+) |
| G1530718 | NA | non-coding | downstream | 198069 | 25453848 ~ 25456024 (+) |
| G1530367 | NA | other | upstream | 249628 | 25004761 ~ 25005609 (+) |
| LOC110495887 | LOC108430494 | other | upstream | 732291 | 24520697 ~ 24525649 (+) |
| G1528194 | NA | other | upstream | 2093946 | 23158833 ~ 23161291 (+) |
| LOC110497098 | LOC106574424 | other | upstream | 2643785 | 22599016 ~ 22641368 (+) |
| G1530785 | NA | other | downstream | 310692 | 25566471 ~ 25571346 (+) |
| G1530923 | LOC106574292 | other | downstream | 582727 | 25838506 ~ 25840353 (+) |
| LOC110496782 | LOC106575224 | other | downstream | 678401 | 25930184 ~ 25943678 (+) |
| G1532307 | NA | other | downstream | 1501590 | 26757369 ~ 26757677 (+) |
| LOC110495947 | LOC106575089 | other | downstream | 2380761 | 27629477 ~ 27750060 (+) |
