G1531057


Basic Information

Item Value
gene id G1531057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 25407171 ~ 25409573 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1752833
ATGTGCATGAACATAAAGCACTTAgctaactactgtaacatttgTATAATGAATGAATAGGGACTCCTATGTCTTTCCATGCCAATATTCAACAGCATACAGTCCCGTGTGGTTAACTTGCGACGCCGTGGCTATGGGATCGATTGTCATGGGGGACCAGTTAAAAgtgtgaaaatgtatgcactcactctggataagagcgtctactaAATGACTCCAAAAAAGGAATAAAGGGAGATCTCATCCATCTTTAAAATGATATCTTTATTGTTTGATCATTgaaataaatacagtaccagtcaaaagtttggacattccagggtttttctttatttttgactattttctacattgtagaataatagtgaagacaaactatgccgcaccaatgtgtcggaggaaacaccgtgcacctggcaaccttggttagcgtgcactgcgcccggcccgccacagaagtcgctggtgcgagatgagacaaggatatccctaccggccaaacccaccctaacccggacgatgctaggccgacctcccggtcacggccggttgcgacagagcctggacctcACTGTTTTCTCATATATTTTtcatcgccccagtctgaggtcctgtgcgctctggagcaggttttcatcaaggatctctgtactttgctccattaatctttccctcgatcctgactagtctcacagtcccccCCGCTgtaaaacatcaccacagcatgatgctgccaccaccatgcttcaccgtaggaatggtgccaggtttcctccagatgtgacacttggcattcaggccaaagagttttatcttggtttcatcagaccagagaatcttgatcctcatagtctgagagtcctttaggtgccttttggcaaattccaagcgggctgtaatGTGCCTTGTACTGAGAGGTGGCTTCCGTCTAATGTGtgcgctgggagtcgggaagcaggttcagggagtgaataatttaataaataaacaaaacataatacagaacaagaaacacgaacaacgcacagacatgaatcTGTAACAGAAACAATAACCCCTGGAGAAGGATCCAAAGGAAGTGacatatatatagggaaggtaatcaggcaggtgatggagtccaatactgcagaaatgtattggtacccttccccagatctatgcctcaacacaatcctgtctgagctttacggacaattccttcgacctcatggcttgatttttgctctgacatacactgtcaaccgtgggaccttatatatagacaggtgtgtgcctttccaagtcatgtcaaataaattgaatttaccacaggtggactccaatcaagttgtagcaacGTCTgaagtatgatcaatggaaacaggatgcactggagctcaatttcgagtctcatagcaaagggtctgaatacttatgcaaatgtatttttttattttttattattataaatgttcaacaatttctaaaaacctgttttcaccttgtcattatgggctattgtgtgtagattgatgagggggaaaaaactatttaatccatcttcgaataaggctgtaatgtaacaaaatgtggaaaaactcaatactttccgaatgcactgtatgctaaTAAAATGGCATAAATAAAATCCATATTGTGAAGCCGAACATGATTCACATCAATGCTATTAAACTCACCAGATGCTGATTGTGAAGTTGTACTATCAGCCGAGGCTCCACAGTTCGATTCAACTAGATTGCCAAGAACATGGACCAATGAGCTTCCACGACTCAGAATGGCTGTCTTCAGCGGTGTCAAATGATTGAACTGGACAGACGACAGGCAGCCAATGAAACCCTTGGATCCTGCCCTAAGCACTTCCTCATCCAAACAAGCATGTCCTGCTGATGTACCTGTGACTTTACCTAAAGTCAGAGATCGTAGTGTGTTCATCTTCATGCCAGAAAAGGGTTGTATTTTTGGTCGATGTCTTTGTCAATCTGGTTTAAGAAAAAAGGAAACATTTCCAAATACAGTTCAACATGCCATCAAGGTGGGCTGACTGTCTATGCTGTAAGCATAATGCTTTGCTATGTTGAAATATATTccgattgtcacgccctggccatagagaggcttttattctctattttggttaggccagggtgtgacttgggtgccCATTCTATGTTCGTTTTCTATGTTTTtcttgtttggccgggtgtggttctcaatcagaggcagctgtctatcgttctCTGAcggagaaccatacttaggtagtctTTCCCACCTGAGTTTTGTGGGtagttttctgtttagtgtttgtaTCGCCGTTAagaactgtttcggttattccttttgttactttgtatttaaGTGCTCCGTTCTATGTAATaaatatgaacacgtaccacgctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1752833 True 2403 lncRNA 0.43 1 25407171 25409573

Neighbor

gene id symbol gene type direction distance location
LOC110495907 LOC106574282 coding downstream 12026 25392267 ~ 25395145 (-)
LOC110497105 LOC106574281 coding downstream 15807 25377735 ~ 25391364 (-)
LOC110495906 LOC106574280 coding downstream 29635 25348864 ~ 25377536 (-)
LOC110495905 LOC106574279 coding downstream 63672 25283955 ~ 25343499 (-)
LOC110495903 LOC106574275 coding downstream 128226 25272564 ~ 25278945 (-)
stat1-1 stat1-1 coding upstream 827 25410400 ~ 25427083 (-)
LOC110496923 LOC106575216 coding upstream 28350 25437923 ~ 25440347 (-)
LOC110495910 LOC106574285 coding upstream 44168 25453741 ~ 25474749 (-)
LOC110495911 LOC106574287 coding upstream 81945 25491518 ~ 25498651 (-)
LOC110495912 LOC106575218 coding upstream 95309 25504882 ~ 25530613 (-)
G1531050 NA non-coding downstream 71211 25333565 ~ 25335960 (-)
G1531039 NA non-coding downstream 124321 25282646 ~ 25282850 (-)
LOC110495901 LOC106574277 non-coding downstream 146768 25257000 ~ 25263674 (-)
G1530981 NA non-coding downstream 234368 25172572 ~ 25172803 (-)
G1531063 NA non-coding upstream 60052 25469625 ~ 25480582 (-)
G1531132 NA non-coding upstream 78247 25487820 ~ 25488050 (-)
G1531134 NA non-coding upstream 79123 25488696 ~ 25488908 (-)
G1531145 NA non-coding upstream 111823 25521396 ~ 25525185 (-)
G1530967 LOC106574270 other downstream 256177 25150068 ~ 25150994 (-)
G1529613 NA other downstream 1013487 24393375 ~ 24393684 (-)
LOC110497104 LOC106574262 other downstream 1123177 24279738 ~ 24371432 (-)
LOC110495852 LOC106574460 other downstream 1863678 23542411 ~ 23543631 (-)
LOC110495851 LOC106574449 other downstream 1865915 23479558 ~ 23541681 (-)
G1531142 NA other upstream 109848 25519421 ~ 25523180 (-)
LOC110495915 NA other upstream 163865 25571910 ~ 25574981 (-)
G1531236 NA other upstream 286966 25696539 ~ 25708874 (-)
G1533378 NA other upstream 1778049 27187622 ~ 27189549 (-)
LOC110495948 LOC106574314 other upstream 2344601 27754174 ~ 27798978 (-)

Expression


Co-expression Network