G1531063


Basic Information

Item Value
gene id G1531063
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 25469625 ~ 25480582 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1752839
CCTGACTCAGTCGGAGTTTTGTGGTTCCCTCCTGTCAACAGACTATTGGAGGTAGTGAAACCAGGCTGGTTTCAACATCTTGGAGGTAGTGAAACCAGGTTGATAAATTGGGTCGAATAAAAATGGTTGCCAAAATGACTCCATCAAGTTGGTTAATGTTTGTGTCAGGCGCAAACATATTCACCAGAGCTCTGCCTTGAAGTTGCAAGCATTTAGGCCTATGACCATGTGATTACTGTCATCTCAAGAATTACAGGCTAACCCACACATTAATTAAATAATTCTATTTTGCATAGATTGTTCATTTCATTTGGTCACAGCTGAAGTAGTCACGCTGCCTTGTTTTTGCTTATTGAACTCAACTGAACTCCAGTGTATAAATAGCGCAGTAGATGTAACACACTGACTGTAGGCAGtgtgcggttggaggccgagggTTAGGCTATATGGCGAGCTCTGTGCAGGGCTTCCGACGAGGCACTCTCTCTACATGCTGCACACAGTTGAACTCATAAAGCTGCACGGAGATACAGGTCGAGGCagtggaggggggaagagaggggagggagggaggaaggccaGCTAAGGCTGGGTGAGAATTCATTAACGGAGCATCATCAGCACCAATCCAGATGTTTCACACCTCCTAGTAGCCTGCCTGTTGGGACTTCCTACTATCCTGGGGTGAGGGCAAGGGCTTGGAGACATGAAGCAGAGAGGGTGATGTCCATATGGGCAGTTTAGAACACAACACACATCCTCAGTTTAATGTTTTGTTTTACACTGTGCTTTGGGAAGGGTATAATGATTATTTTTTCAGGTTCTGCCATGCCATGGTTTTCACTGTTGTTCTGCGGTGTTGGATGTGTCCTAAATATTGAACGCGTGTGTTAATCCATGAATCTGTGTGTCTTATCAGTAGGCCGATCtgcttgatgatgatgatgatgatgcactACGTCACTTAGTTTGTTCTAAtgccactcactcactctgcatATTTTCTCTCCTTTTTCGTTTGATCCGCTTGCTTTGCCTTGGTGTGTAAGTATATGTCTCaatttattcattcattctcGTGTAGATGTACTGTGGTGTTTCCAGGCTAAGCCTTGCGGCTGCTGAGTGCTCTCTCTTCAATTCTCTACCTCGAAGTGTCCTCAGCCTCTACAAGCGACCGCGCTTGACTTCCCCAGCTGTCCCACCGGACATTCCTCTCTGGCAGGCATCAGCAATCCAGAAATGACTCCAGAAATGGACCAAGGACCACAATCAAATAGGCCTTATCAAATCATGTGTCATGGAAATGATAAAGGATCGTAATCATTTAAGAGTAGGAGTCAAAACAAACGAATACGGCTTAAACAACCTCCAAACTGGAAGAGACCCTTTTAAACAACAACAAACTGGAAGAGATCCTTTTAAACAACAACAAACTGGAAGATACAGTGCAGTGTCCGGAGTCTGAGTCATTCCTGGGTAGCTGATGAGGGCATTTGACCCTCTACCAAAGTTCTTTTTATCCGTTTTTAAACGTTGTGACGTCTTCTTAATCGCTAGGGCAGGCTACGGAGCTGGGTTACTATAGCTCTATTGCCTGTCTGTCCCATGATGCATTGCGGGACTGACTGAGCCTGAGCTCCCACCCACCTCCCTCAGAGATCCTATGGTGGATCATGATGAAATACATACATCTCGTTTAGGCCTAACGACAGTATTCCACCTATCTATCTACCTCTAACATACTGTACTAACTCTCCTCTCCCAGAGTGAGTGGAACGGATTTGGAGCTGCTATGCATAATACCTGTCAGTAAATGGGCCAATGACTCACTTCAAGCTGATAGGCATGTATTTAAATTGACATAAAACTAACAAAGTCTACCTTATTTATGATTGAAGATCCATGCAAACAAGATATTGTCTATAAAAAATTCTCTAAACTCTCCTTGAAGTATCAGACTGGTGTTTTGGAAGCAGGGTTCAAACCCTTTCCTTAAATATGGGGCTGTAACGTGAAGTACTCACCACCTCTCCTCTACAGTATTATAGCTAGTTAATCCCGGCCCCCTGCTGCTGTTCCCCATTGCCTTTAGAGAACCCTGGCCGTTcctcactctctgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1752839 True 2146 lncRNA 0.45 3 25469625 25480582

Neighbor

gene id symbol gene type direction distance location
LOC110496923 LOC106575216 coding downstream 29278 25437923 ~ 25440347 (-)
stat1-1 stat1-1 coding downstream 42542 25410400 ~ 25427083 (-)
LOC110495907 LOC106574282 coding downstream 74480 25392267 ~ 25395145 (-)
LOC110497105 LOC106574281 coding downstream 78261 25377735 ~ 25391364 (-)
LOC110495906 LOC106574280 coding downstream 92089 25348864 ~ 25377536 (-)
LOC110495911 LOC106574287 coding upstream 10936 25491518 ~ 25498651 (-)
LOC110495912 LOC106575218 coding upstream 24300 25504882 ~ 25530613 (-)
LOC110495916 ahr1 coding upstream 69481 25550063 ~ 25630757 (-)
LOC110495915 NA coding upstream 91328 25571910 ~ 25574981 (-)
LOC110495914 ahr2d coding upstream 154243 25634825 ~ 25717780 (-)
G1531057 NA non-coding downstream 60052 25407171 ~ 25409573 (-)
G1531050 NA non-coding downstream 133665 25333565 ~ 25335960 (-)
G1531039 NA non-coding downstream 186775 25282646 ~ 25282850 (-)
LOC110495901 LOC106574277 non-coding downstream 209222 25257000 ~ 25263674 (-)
G1531132 NA non-coding upstream 7238 25487820 ~ 25488050 (-)
G1531134 NA non-coding upstream 8114 25488696 ~ 25488908 (-)
G1531145 NA non-coding upstream 40814 25521396 ~ 25525185 (-)
G1531165 NA non-coding upstream 79575 25560157 ~ 25560513 (-)
G1530967 LOC106574270 other downstream 318631 25150068 ~ 25150994 (-)
G1529613 NA other downstream 1075941 24393375 ~ 24393684 (-)
LOC110497104 LOC106574262 other downstream 1185631 24279738 ~ 24371432 (-)
LOC110495852 LOC106574460 other downstream 1926132 23542411 ~ 23543631 (-)
LOC110495851 LOC106574449 other downstream 1928369 23479558 ~ 23541681 (-)
G1531142 NA other upstream 38839 25519421 ~ 25523180 (-)
G1531236 NA other upstream 215957 25696539 ~ 25708874 (-)
G1533378 NA other upstream 1707040 27187622 ~ 27189549 (-)
LOC110495948 LOC106574314 other upstream 2273592 27754174 ~ 27798978 (-)

Expression


Co-expression Network