Gene
RNA
| Item | Value |
|---|---|
| gene id | G1530787 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 25567123 ~ 25572188 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: rho GTPase-activating protein 21-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1752536 | True | 383 | lncRNA | 0.45 | 2 | 25567123 | 25572188 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495909 | LOC106574290 | coding | upstream | 159686 | 25405613 ~ 25407437 (+) |
| LOC110495908 | ftcd | coding | upstream | 163559 | 25397926 ~ 25403564 (+) |
| LOC110495902 | LOC106574278 | coding | upstream | 294612 | 25263995 ~ 25272511 (+) |
| dhrsx | LOC106574274 | coding | upstream | 337302 | 25197244 ~ 25229821 (+) |
| sh3bp4a | LOC106574293 | coding | downstream | 286808 | 25858996 ~ 25884157 (+) |
| arl4ca | LOC106574375 | coding | downstream | 321129 | 25893317 ~ 25896446 (+) |
| LOC110496782 | LOC106575224 | coding | downstream | 357996 | 25930184 ~ 25943678 (+) |
| bzw1a | LOC106574295 | coding | downstream | 389529 | 25961717 ~ 25973319 (+) |
| kynu | LOC106575231 | coding | downstream | 680933 | 26253121 ~ 26267132 (+) |
| G1530781 | NA | non-coding | upstream | 3749 | 25562980 ~ 25563374 (+) |
| G1530779 | NA | non-coding | upstream | 6622 | 25560298 ~ 25560501 (+) |
| G1530761 | NA | non-coding | upstream | 43830 | 25519530 ~ 25523293 (+) |
| G1530749 | NA | non-coding | upstream | 73252 | 25491552 ~ 25493871 (+) |
| G1530718 | NA | non-coding | upstream | 111099 | 25453848 ~ 25456024 (+) |
| G1530819 | NA | non-coding | downstream | 48020 | 25620208 ~ 25620444 (+) |
| G1530821 | NA | non-coding | downstream | 50422 | 25622610 ~ 25622821 (+) |
| G1530822 | NA | non-coding | downstream | 50914 | 25623102 ~ 25623315 (+) |
| G1530832 | NA | non-coding | downstream | 62017 | 25634205 ~ 25634673 (+) |
| G1530853 | NA | non-coding | downstream | 197710 | 25769898 ~ 25770704 (+) |
| LOC110495895 | LOC106574270 | other | upstream | 411228 | 25133210 ~ 25157338 (+) |
| G1530367 | NA | other | upstream | 561514 | 25004761 ~ 25005609 (+) |
| LOC110495887 | LOC108430494 | other | upstream | 1044177 | 24520697 ~ 24525649 (+) |
| G1528194 | NA | other | upstream | 2405832 | 23158833 ~ 23161291 (+) |
| LOC110497098 | LOC106574424 | other | upstream | 2955671 | 22599016 ~ 22641368 (+) |
| G1530923 | LOC106574292 | other | downstream | 266318 | 25838506 ~ 25840353 (+) |
| G1532307 | NA | other | downstream | 1185181 | 26757369 ~ 26757677 (+) |
| LOC110495947 | LOC106575089 | other | downstream | 2064352 | 27629477 ~ 27750060 (+) |
| LOC110495958 | LOC106574318 | other | downstream | 2374890 | 27943362 ~ 27958807 (+) |
