G1531236


Basic Information

Item Value
gene id G1531236
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 25696539 ~ 25708874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1753025
GTACTCTTGAGGTCCAAACTGGACCtgctcttttatttttttattttttttattcaacttggcaattcagttaagaacacattcttatttacaatgacggcctaccccggccaaacgacgctgggccaattgtgcgccgccctatgggactcccaatcacggccagatgtgatgcagcctggatcgTCCTTGCTCTGTCTTGCCCCTCGCCTCAATCATAGACCACTGAAGGATGATGGGAAGGAGGCCGGCCTAGAGCCGTAAGGTGTCGCGGTTGATGAGAAAAGCCCTAGGGTTGTGTCCCACGCCTCCCAAGGCGCTCCACATAAGCAGCACATTGCAGCTTCCCCATGATCGTCAACCTACTGGCCCACCAGACCAAaatgtgctctctctccctgtctgctgAATGTACTGTGTTTTAATCTCCCACGGGTGTCTGCTCTCTGCAGGGGCCCCACTGCTACACAATCTATCTGTTGTCTAtctgggccgcccccaggtgatgagggtaggaaacaacatctccaccccgctgatcctcaacaccggggccccgcaagggtgcgttctcagccctctcctgtactccctgttcacccatgactgcgtggccatgcacgcctccaactcaatcataaagtttccagacgacactacagttgtaggcttgattaccaacaacgacgagacggcctacagggaggaggtgagggccctcggagtgtggtgtcaggaaaataaactcacactcaacgtcaacaaaacaaaggagatgatcgtggacttcaggaaacagcagagtgagcaccccctatccacatcaacgggacagtagtggagaaggtggaaagttttaagttcctcagcgtacacttCACGgataaactgaaatggtctacccaCACATACAGCGTGGTGaaaaaggtgcaacagcgcctcttcaacctcaggaggctgaagaaatttggcttgtcaccaaaaacactcacaaacgtttacagatgcacaatcgagagcatcctatcgggctgtatcaccacctggtacggcaaacGCTCCgcacacaaccgtaaggctctcccgagggtagtgaggtctgcacaacgcatcaccggtggcaaactacctgccctccaggacacctacaccacccgatttcacaggaaggccaaaaagatcatcaaagacaacagccaccggagccactgcctgttcaccccgctatcatccagaaggcgagatcagtacaggtgcatcaaagctgcgaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagccatcactaacattgagtggctgctgccaacatactgactcaaatctctagccactttaataattattaattggatgtaataaatgtatcactagtcactttaaacaatgccactttatataatgtttaaatCCCCTACATTACTctctaatctcatatgtatatacaatACTCTAtacaatctactgcatcttgcctatgccatttggctatcgctcatccatatatttatatgtacatattcttattcattcctttgttgttgtgaaattgttagattacttgttagatattactgcacggtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaattgtactTTGATTTGGTCTCACCATGGTGGTTATCTTTAGTGTGGGACCCCAGTTCAGAGTAGAAGTGTCAACCAACCATTTCCACACTTGATATCGCTCAGATATCTTCTGATTGAGAAGGAATCAGAATGTGCGTGACCTCACAAAACAGCTTGTAGTTGCGACATTATTCCCATATCAACAATATCCACCCATGGGGAACAACAGTGAATGTTACTAGATGTGTGTGGCTGAGCTCACCATGCGTTCCCGACTGCAATATGAACCGTGGTCTTTCAAGGCCGTCTTCGCACCACCCTGTGAAGTAAGGGAGTGTCAGTGATAGTGTGGGAATGGAGGTTTGACACTGTACGACTCTGAGCTGAGGGTCAGTAAAGTCGAAAGGTCACCACCCGTGAATCCATGTGACTCTAGACTCTATGTTGAGACAACAGACATACTCTGTATTAGTGGGGCCCATGCAGAGTGCAGTAACCCGGGGGAgataaacactgtgtgtgtgtgtgcgtgtgtgtgtgtgcgtatgtgtgcgtgtgcgtgtgtgcgtgtgtgcgcgtgcgcgtgtgtgtactGTCAGCAGACAGGGAGAAGGCATACTGGGATCTAGTGGGCCAGTAATTCTGATCATGTTGTATCACTGGATCTATGGTTCCTGACAGTGGTCTGTGTTGATGACGAACAGCACTTCACCCAGAGAAGAACTCAGAGACAGTCGTGATTGTCgaccaaaaaaaaaacacactgaaGCACCGCTTTACCTTTATCcgtcacacacaacacacacatccatccttccttccGTTGTCTCCCTGCCGAGCTCTCTGGCCTTTGTCTCTGTGAAGCCTGTTTATCATCTCTGGGATCTGAGGCTGCCTGCCTGCTGGGCGTGGAAGGGTGGAGGGGCACGTTTGGGGAGGGAAGCTCTGGAGCATTGCTGGCTGGCTGCACAACCACAACACGAGGGACTGCTGTCGGAGTCAGCTGTGTTTGCCTAGTGATGGATCTGACATATATATTATTGGTAGGCCTAACCCCTGTCACATTCCAGCTCTACTTATTGGAGCAGTGTTTAAATGAAAACGAGGAATAGGCCGTGTCCCATTATAACTGAAATATACCTGTCGTGTTCTTCATGTTCCTGTGGACCTGTAAGGTGTGCAGGTTTCTGTAGTCCTAGCATGGTACTACTAACATGTCAGATTCAACTCTTCATTATAAGTTGTATTTTAGTTGAATTTGTGTTGGTGCTGGGCTagagcaaaagcctgcacaccttgTGGGTTCCTAGGAAACAGGTTTGAAGAGCACTCCTCCATTATGTAAAGTCCTATGAAATAAATCTGGGGCCATGCCTCCCAAATTTATCTCCGTTAGCGAtgccttgttcaggggcagaacgacagatttgtaccttgtcagctcagggattcgatcttgcaacctttcggttactagtccaacgctctaaccactaagctatgCTGCCGCCCCGATACGCCCTGTATCCCTTTGTTGATTTTGAAGTCATCATAAATAGCTGCCAGAAGGATGGATGCAATTTGTAAAGTGCATGATCACACACCAGATCAATTTGCATTGCTATTGCCATTCTTCTAGCCGGTCTATGTGACGCCATTGTAACTGCAGTGAGTAAGCGGTTAGTGAATGGGATGGTGTCTGGACATGTTCAGCTGGGTAGTGTTTGACATTGTAGACACATTGAGGgctacggacacacacacacacacatgcacgcatgcacacacacacacgcacacatgcacacacacacgcacacgcacgcacacacacacacatgaacaaacacacacacacacacacacatgaacaaacacacacacacgtacacacacacacacacacacacacacacacacgaatgcaaACACTGCTCCAGGACATAACATGATAAAATGGAGTGAGGAGAagtcacagagacagagaggaatgttCCCTGTCACTATTAGcagtgacctctaacccctgacctcccAGAACAACCTCACAGGCTCTGGCAGGCTCAAGGTTTTGACATGTTGTTGTTGACTACCTAGacaccagggtttcccaaactcggtcctggggccccagTCTGTCCTCTACTCAACACTCGGCCTCAGAAAGTGTaattgccctagcactacacaggtgattcaaataaccaactcatcatcaagctttgaataTTTGAAATCcgttgtgtagtgctagggcaaagaAACTAAACCCTAACCTAGACCAAGGACAGGTACAGTCATTACAAAGCTTTAGTTCAAATACCTGTTTGAGAGGGATAACAATCACTGCTAGTCTAACTCTATGACAGAATGAGGCCCCAGTCTTAGGACTGACAGTGTGTACTGAGTTTTACCTTAGATGACGagtgctctctctgtttctccctcctacCGCTCTCTTTCACCTTCATTTTCTCACTCTTTTTTTCTTCCACTCACCCCCCCGACCCGCTCTTTACCGAGCAAAGTATGAAAGCAGACCAATACCTGAAGCATTATAATGGGATTTCTATAACCGATTCAGGCAACGGTAAGACACACCATCCTTTTTTTCAGATGGGTAAATATCCTAGGACATATGACAACGATGAAGCTGTTTTGTGAATCACACTAACAGAGTGGTTTATGAGCCTATAATGTCACAACCTGACTAAAACACAAGTCACTCTGTAAAAGTTTAAATCTGTTTTTGAAGAACTGGACTAGTCACATGAATTCTTTCACTATGACACATAGTTATAGTGTTGTAGGAATGTCCCCGTGGGCACCGCAATAAGAATAACAACAATGGTGATTATTTAACCACAGTGATATTACCATCCTCCACCCATTTAACACAACGATGTCAAGACCGGCTTGTGATTTACAGCCCAGTACACACTGAGTAAACCAAAAAAAGACATATCGCCATGAAAGCCAAACTTTAATGACATgctctttttctcttttttttctactacaGTCGTTTTCTTCTCTCCGTTttcttctctctgttttcttGTGGCACAGTGGGTCTTTGGCGGGTACTTGGGCATGTTCCTACTTGAGCAGCTAGCCGCTTGCTGCTGTGTTTTGACTGGGGTTGTGCTGAAGAGGGTAAGCCAATAGTCATGGCCCTGTGCTAGCTGAGAGGTCTAGGATGGAGTCCTGCATTTGGGGGGTTGGGTGGACCTGGGAAGATAAGGAAAAATCTAGCTTTGCACAAGAGTGCAGTTCAGTGGCTGCCACAGACCAAGGGCTCTGTAATTTACTCCAGTGTTGCTTCATGCCCACCTTGATCATCTCGCTGGCTTGCTTAGATTGGGCACAGGGTGAACAGGCCCCACCcctgtcataaaaaaaaaaaatccaacttATTGAGCAGGGCCCTCTCTGCAATGTAATCAAACACAAGGCCAAACAGTTGGTACATGTACAATATCTGTGTCTGGTTAGCGTGAGCTCCTCTACTTTCCAGCTGGTGTCGAGGTCCTGTGTTTGAGTTATGATCAAGTTCCATTGCAGGCGAAGTGCCAAGACTGAGGAATCTGCCACATGCCTACTAAGCCATATCACAAACCCAGCAGATTCCTTCAGGTATACCGACCGCTAGCTAGCTCTGAAATACTAGCCCTGTGCAGTATTTGAACTAAAATGTCACTGTAGTCTCTGCCCGTAGTTGGGATTGAGTTTAACAAGATATTTCTATCTGTAAATTCCCCAAATAAAGAGTTATGCATTGTAAGGCATTGATTGCTACAATGTCTACATATGACATTTTTGAGTAAACGGTGGTCAGAGATGAGTAAGGGAAGGGTTAATGTTAaggttaacctctcttgggtagggggcagtattttcacttccggatgaaaagcgtgcccaaagtaaactgcctgttactcaggcccagaagctatgatgtgcatataattggtagatttggatagaaaacactctgacgtaaAACTGTTaacattatgtctgtgagtataacagaactgatatggcaggtgaaaacatCTCCCCCCCAAAATGTTCATTCTACCACTGTTTGGTAGctggctgtcacttttattataaggtgAAATCCTACCAGATTGCAGTTCCTTGGCCTTATATtacatgtcaacagtctttagaaagagtttcatgctGATATTTGGAGAAattagccagaaattgtagtttttctaggtggctcccattttgctGTAGTGTTTCCAAACGCGTGAatgagagcgcgttctttggtatttttctccagtaaagacaataacaattctccgtcttaaattgtatagtttatttacgtattaggctTCCTatggtttgattataaacgttgtttgatttgtttggaaaagtttaatAGTAACGTTTGAGATTCATTTGGTAAGTGGTAAGCAGCAGTCGAGTAAAGCTGTCTCAATCAGGCCAGGTTAAAGGTCACCATGCAGGACAGGTTGAGACTGGCCCTAATGACCTACAGCTTTCAATCTCTTTCAATCAATGTTCCTTGTAGAGCTCAAgccctttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtttgtgtttgagagagaggaaTTTCCTTTTTTCCACATAAGAAATTACTGTAAGAACTTTACAATTACGTTAGAATGAATGACTCAAGCCAAAACAAATATTGACGTTCTGCCTCCCTCTGAAACGAACTGCCTCTTTTTTTCCTACCAACAATGGAGAAGCCATCAAACTTTCTCTCCGTGGAAGAATACAATGGTTGGAAAACAAATAGGACCAGGAAAATCAATGCTTGGGGAAGACAATGTCAAAAGTTGCTATTGTAATTTGAAGTAAGTAAGTAAAAGAAAAAGGGCTTTTCGTATTAGCTCCCCACACTAGTTGAAAAGGAGTTGTCAGTTGAGAGTGAAAGTCAAAAGGGGTTCTCGTAGAGCAAGGGACTTGTAAGTCTACTCCTTATCATTTCTGTAGACCTACTCCTTATAATTTCTGTAGGCCTGCTCCTGTTTCTTTCTGTAGGTCCTACTCCTGTTACTTTCTGTAGACCTACTCCTTATCATTTCTGTAGACCTACTCCTTATCATTTCTGTAGACCTACTCCTTATCATTTCTGTAGACCTACTCCTTATCATTTCTGTAGGCCTGCTCCTGTTTCTTTCTGTTGACCCACTCCTTATCATTTCTGTAGACCTACTCCTTATCATTTCTGTAGACCTACTCCTTATAATTTCTGTAGGCCTGCTCCTGTTTCTTTCTGTAGACCTACTCCTTATCATTTCTGAGGGCCTACTCCTTATCATTTCTGTAGACCTACTCCTTATCATTTCCGTAGGCTTGCTCCTGTTTCTTTCTGTGGGTCCTACTCCTGTTTCTTTCTGTGGTCCTATTCCTGTTTTTCCCTGAGTAACAACAGAAGCAGCTGCATGATAAGAACAAGAAAAGAGCAGCAGGCAATAGGGCACTTTAGTCTACTATTACGTTGTTCTCTTTAGCAGACCTACACCAACCTGAAAGGTATCGGCTGGTCCATTACGTCCAGTTGAGTTGTTTTGATGCGTTTCCTTATTATTGAGAGATCAGATTGAGATTGGTGGGAACCGAGGGTATTAGGGGTGGTGTGGTTTTAtaagggggggaggaggggtttGGTGAATCATCACTTCTCGTTTCTGATGCATGAGTTCAACTTTTGGAGAGACgtgaggaaacagagagaaactTCATCTCTCTGAAGGACAGCTGTTATGTTTTCGCCCTTCTTTTATAAACCTCCTGTGTTATTCAGCTGTCACTGAGTCACACACTCTGAAACTAACAACCCCACAACAGAAGAGATAGTctaggagggggagggggggacgaTTCCTTTATTTTCATTGAATACACAGAGGATGTATAATAGACTTCTCCTTTTACAATGTGTCATGAGAACGGTGCGAGTTAACAAAAGAAAGACCGctagggacccccccccccccccccccccctttaagtCAAAACTAGTCATTTTGGCTCCAACATTCTAACAGcctaataaatacatttcatatatgcTATCGGAAAAATACTCCTTTGATTGTGTTTTATGAAGGTCTTGGGTAAGAACACTATatcattttcatttgtttatgtTACTGTAGGCCATCTGTTGCCACATGCTCAAGTGTGGAGCTCATGAAACAGTGGTTATTCTTGGAAAAGGTGTATTGTGAAATAAAGCTCATCTCTTACATTTTGTAAGAGTTATTCGGAAATGTTAAGTGTTTTGGAAACTTCAGGACCTGCTCTTTCTGATACTATATAAAAATCAAAATGTCTTACCAGCATGTGACTCTGTAGGAGGATTTGAAGAAGTCCTCTTCAACTGGTTAGAACACAAATTCTGTGTGTGATATCGAAATGCTAACAACATATGTGTCTTAAATATGCTTATTTTGGAAAAGTTAAGGATGGAGGTGGGTCATGACGTTAAGAAATGGCAGAGATATGTCAATTTGAAATTCATATTAAGTCAAAATGACTCACTTGGCTTGTCTAGTGTTAAAGGAATTTGTTAGAATTAgcggttagaattagtgttagaattagTGTAAggggctcagcggtctaaggcgcaacccttggtttgatcccaggctgtttcacagccggccgtgaccgggagacccatggggaggcgcacaattggcccagcatcgtccgggttaggggatgaTTTGGCCGGCCTGGATTTGcttgtcccattgtgctctagtgactccttgtggctggCCGGGTGCCTTCAAGCTGACATGGTCACCAGttggatggtgtttcctccgacacatgggTGCGGTTGGCTTCCTGGTTAAGCAAGCATTGCTGCTTTGCAGGCTCaggttttggaggatgcatggatttcgaccttcgcctctcccgagtccataggggagttgcagcgatggaccATAACTACCAATTACCAAGAccataactaccaattggggagaattgtttatattttttataattagTGTAAGGATTAGATTTAGGGttttgaatggaaatacattttaggtccccacaaggatagtaaaaggtgagtgtgtgtgtgtgtgtgtgcgagcattTGCTCAAGCGTCTGTGCTAGTATGTGTTTGTTCATTTGTGTATATGTGGGCTTCCAAGTGGCACTggggtttaaggcactgcatctcagtgcaagaggcagtgattgggagtcccacagggtggCGCACAATTCGCCCGGGTTTGGctgtggtaggctgtcattgtaaataagaatttgttcttaactggcttgcctagttaaatacattaaagtgtgtgtgtgctccttaGTCAGTTATCAAGGGGAGCATGTTGAGTAATCTCCTTTATGTATACAGGAAGCTCTCTTTGTTCAGACTGAGTGGCTCAACATAAATCAGGCTGAATAGGAATGCCTCATTGATGCCTGGTGTCTCAGAGCAGCAAGGTGTCTGCTAACCTCCGCTCCAACCCTTCACCTCTGATCTAGCGCTGGATCTCTCCCTGCTCTTCTGGCGAGAGACGGGGATTAGATGCAGGATGTCGGATGGTCATCCAGCTGGGCTGGATAGGACTGGACTGTGACTTTATTGTTCAGTTAGCGGCAGTTCTAATTGTGTCCCTCCGGTGATGACATGGCTCAGGAAGGGAATATCCATTTCCAACAGTCCACTTCCCTGAGTTTGTACAAACAGCTGAGTGTGTTCCTATCCAGAAGACTGTTGAATAAGAATGTGCATCAGGATACATACCTGCAATGATAATTCATAAGAGCAGCGATGATCTAGTGTTTCTGGGAGGAAAAATATGTTTCCTGACTatggctgtatcacatccagacatccaggctgtatcacaacgggccgtgattgggagtcccatagggcggtgcacaattgacccagcatcgtccgggtttggccggtgtgggccgtcattgtaaataagaatttgttcttaacagacttttctagttaaataaaggttaaataggggcctcccgggtggctcagtggtctaaggcgctagctgtgccaccagagaccctgagCTCCaacacagccggccgtgaccgggaggcccatggggcgatgcacaattgccctagcgtcgtccgggttagggagggcttggccggtagggatatccttgtctcatcacacaCTACCGACTCCTgtggcgcagtgcacgctgaccaggtcactaggcgtacggtgtttcctccgacacattggtgcggctggcttccatgttggatgcgcgctgtgttaagaagcagtgcagcttggctgggttgtgtttcagaggacgcatggctcttgacctttgtctctcccgagcccgtacaggagttgtagcgatgagacaagacagaaacgactaacaattggataccacgaaaaagggggtaaaataaaaataaataaataaaggttaaatcatttTGCAAATAATAaaatagggctgtggcggtcacagtGTTGTCAGCCGGTggttgtcaagcaaataactgtccgTCTTAActtaaacacatttagcatctcctggcttccacacatagcctacaagccacggATGCAGACCtctggaacatctacattttaacaGCCCTGATTCAACTTCTTTTTTTTAATAAGAAATGTTTGCCTCTTCGGATTTTCTGAGTTTCTGAGTTTCTGAGAAATGTTTTCTCAGTTTCTTCCATGAAGACTTCCTTCTGAAACTCAAACACAGGTCTAGGGTTGCAAGGGTTGGAAACTTTCTGGTAAATTTCCGGAATATTtccagaaattttccatgggaattttgcttaaattcatcaaaaaaagttagtttataacagaaccttttttgtgggagacacataaggcaattcaatggaattgcaaccctctgcatgcacagtacattcttccatcacatatacagctgattctcaagatcttgcacactaatgagatgctattaaGCCCACagtactacactgtctgagccaaggactacatgctttctggtaagttttgattaccatactgggtggggtgaatatattttatatgacatacatgttaactagtaaatagtagcctaaagaaaagtgtgtttaaataatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1753025 True 10885 TUCP 0.45 7 25696539 25708874

Neighbor

gene id symbol gene type direction distance location
LOC110495916 ahr1 coding downstream 65782 25550063 ~ 25630757 (-)
LOC110495915 NA coding downstream 121558 25571910 ~ 25574981 (-)
LOC110495912 LOC106575218 coding downstream 165963 25504882 ~ 25530613 (-)
LOC110495911 LOC106574287 coding downstream 197888 25491518 ~ 25498651 (-)
LOC110495910 LOC106574285 coding downstream 221790 25453741 ~ 25474749 (-)
LOC110495917 NA coding upstream 35499 25744373 ~ 25770731 (-)
LOC110495918 LOC106574290 coding upstream 65792 25774666 ~ 25808289 (-)
s100b LOC106574292 coding upstream 129630 25838504 ~ 25840385 (-)
aox5 LOC106574294 coding upstream 226403 25935277 ~ 25961629 (-)
si:ch211-246m6.4 LOC106574296 coding upstream 264796 25973670 ~ 25976403 (-)
G1531208 NA non-coding downstream 76513 25619827 ~ 25620026 (-)
G1531206 NA non-coding downstream 79822 25616396 ~ 25616717 (-)
G1531165 NA non-coding downstream 136026 25560157 ~ 25560513 (-)
G1531145 NA non-coding downstream 171354 25521396 ~ 25525185 (-)
G1531240 NA non-coding upstream 9151 25718025 ~ 25718336 (-)
G1531224 NA non-coding upstream 26575 25735449 ~ 25736981 (-)
G1531266 NA non-coding upstream 63434 25772308 ~ 25772523 (-)
G1531268 NA non-coding upstream 82623 25791497 ~ 25804760 (-)
G1531278 NA non-coding upstream 109570 25818444 ~ 25818697 (-)
G1531142 NA other downstream 173359 25519421 ~ 25523180 (-)
G1530967 LOC106574270 other downstream 545545 25150068 ~ 25150994 (-)
G1529613 NA other downstream 1302855 24393375 ~ 24393684 (-)
LOC110497104 LOC106574262 other downstream 1412545 24279738 ~ 24371432 (-)
G1533378 NA other upstream 1478748 27187622 ~ 27189549 (-)
LOC110495948 LOC106574314 other upstream 2045300 27754174 ~ 27798978 (-)
LOC110496785 LOC106574363 other upstream 2152172 27839770 ~ 27914607 (-)
LOC110495955 LOC106574324 other upstream 2326090 27995381 ~ 28092196 (-)
LOC110495963 LOC106574327 other upstream 2642504 28241494 ~ 28368147 (-)

Expression


Co-expression Network