G1530909


Basic Information

Item Value
gene id G1530909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 25821915 ~ 25822239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1752665
caaagaacagcatacaaacagcAAATGGATAGTATACGATCATCAATTCATTTTCGACTACACaagcaaagtcacaataatcacaagaatggcttcagatcaaagtctacgttgagaccgaagggagcaagggtctttaagttaaagatccaggcagcctctcgttttaacaataaattatcaaggtcaccccctctcctagggagggtgacatgttagatgccaatataacgcagagacaaaatcgagtggcctgcctccaagaagtgggccgcaactggttaagtaaagtttttacacctaatggtgctacgatgctctgaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1752665 True 325 lncRNA 0.43 1 25821915 25822239

Neighbor

gene id symbol gene type direction distance location
LOC110495909 LOC106574290 coding upstream 414478 25405613 ~ 25407437 (+)
LOC110495908 ftcd coding upstream 418351 25397926 ~ 25403564 (+)
LOC110495902 LOC106574278 coding upstream 549404 25263995 ~ 25272511 (+)
dhrsx LOC106574274 coding upstream 592094 25197244 ~ 25229821 (+)
sh3bp4a LOC106574293 coding downstream 36757 25858996 ~ 25884157 (+)
arl4ca LOC106574375 coding downstream 71078 25893317 ~ 25896446 (+)
LOC110496782 LOC106575224 coding downstream 107945 25930184 ~ 25943678 (+)
bzw1a LOC106574295 coding downstream 139478 25961717 ~ 25973319 (+)
kynu LOC106575231 coding downstream 430882 26253121 ~ 26267132 (+)
G1530890 NA non-coding upstream 24804 25796876 ~ 25797111 (+)
G1530853 NA non-coding upstream 51211 25769898 ~ 25770704 (+)
G1530832 NA non-coding upstream 187242 25634205 ~ 25634673 (+)
G1530822 NA non-coding upstream 198600 25623102 ~ 25623315 (+)
G1530821 NA non-coding upstream 199094 25622610 ~ 25622821 (+)
G1530923 LOC106574292 non-coding downstream 16267 25838506 ~ 25840353 (+)
G1531332 NA non-coding downstream 70057 25892296 ~ 25892932 (+)
G1531446 NA non-coding downstream 208486 26030725 ~ 26031545 (+)
G1531450 NA non-coding downstream 214652 26036891 ~ 26037165 (+)
G1531582 NA non-coding downstream 446590 26268829 ~ 26270336 (+)
G1530785 NA other upstream 250569 25566471 ~ 25571346 (+)
LOC110495895 LOC106574270 other upstream 666020 25133210 ~ 25157338 (+)
G1530367 NA other upstream 816306 25004761 ~ 25005609 (+)
LOC110495887 LOC108430494 other upstream 1298969 24520697 ~ 24525649 (+)
G1528194 NA other upstream 2660624 23158833 ~ 23161291 (+)
G1532307 NA other downstream 935130 26757369 ~ 26757677 (+)
LOC110495947 LOC106575089 other downstream 1814301 27629477 ~ 27750060 (+)
LOC110495958 LOC106574318 other downstream 2124839 27943362 ~ 27958807 (+)

Expression


Co-expression Network