G1531450


Basic Information

Item Value
gene id G1531450
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 26036891 ~ 26037165 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1753253
AACTTATGTTTTTGAATAATGGGTTAATTGAAGCAGTGTTCAACATGGTCtgatacagtggtggaaaaagtaccaaattgtcatacttgagtaaaagtcaaatcaaatcaaatcaaatttttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctaactaacaattccaaaactactgtcttatacacagtgtaaggggataaagaatat

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1753253 True 275 lncRNA 0.33 1 26036891 26037165

Neighbor

gene id symbol gene type direction distance location
bzw1a LOC106574295 coding upstream 63572 25961717 ~ 25973319 (+)
LOC110496782 LOC106575224 coding upstream 101912 25930184 ~ 25943678 (+)
arl4ca LOC106574375 coding upstream 140445 25893317 ~ 25896446 (+)
sh3bp4a LOC106574293 coding upstream 152734 25858996 ~ 25884157 (+)
LOC110495909 LOC106574290 coding upstream 629454 25405613 ~ 25407437 (+)
kynu LOC106575231 coding downstream 215956 26253121 ~ 26267132 (+)
LOC110495930 LOC106574301 coding downstream 945816 26982981 ~ 27032712 (+)
LOC110495937 LOC106574307 coding downstream 1209187 27246352 ~ 27256734 (+)
LOC110495939 LOC106574310 coding downstream 1358353 27395518 ~ 27457227 (+)
LOC110495942 pknx1 coding downstream 1425274 27462439 ~ 27477815 (+)
G1531446 NA non-coding upstream 5346 26030725 ~ 26031545 (+)
G1531332 NA non-coding upstream 143959 25892296 ~ 25892932 (+)
G1530923 LOC106574292 non-coding upstream 196538 25838506 ~ 25840353 (+)
G1530909 NA non-coding upstream 214652 25821915 ~ 25822239 (+)
G1530890 NA non-coding upstream 239780 25796876 ~ 25797111 (+)
G1531582 NA non-coding downstream 231664 26268829 ~ 26270336 (+)
G1531595 NA non-coding downstream 269733 26306898 ~ 26307114 (+)
G1531761 NA non-coding downstream 301659 26338824 ~ 26339078 (+)
G1531762 NA non-coding downstream 302929 26340094 ~ 26340300 (+)
G1531890 NA non-coding downstream 401086 26438251 ~ 26438530 (+)
G1530785 NA other upstream 465545 25566471 ~ 25571346 (+)
LOC110495895 LOC106574270 other upstream 880996 25133210 ~ 25157338 (+)
G1530367 NA other upstream 1031282 25004761 ~ 25005609 (+)
G1532307 NA other downstream 720204 26757369 ~ 26757677 (+)
LOC110495947 LOC106575089 other downstream 1599375 27629477 ~ 27750060 (+)
LOC110495958 LOC106574318 other downstream 1909913 27943362 ~ 27958807 (+)
G1533121 LOC106574322 other downstream 1937648 27974813 ~ 28038476 (+)
LOC110495972 NA other downstream 2695610 28732589 ~ 28735229 (+)

Expression


Co-expression Network