G1531645 (LOC106575231)



Basic Information


Item Value
gene id G1531645
gene name LOC106575231
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 26264557 ~ 26267126 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1753475
TGAGATTCACAGTAATTGACTATTTGCTTTTATTTGACATTGTATGGCAACAAACTTGTCTCACTAAATTTTGAGTAGGAATACAATTCCAACCAATTTTGTTTTACTGAGTAGCCTAGGCAAAACATATTGCAATTCTTTGGGACAGTAGTTCAGAAGACCTGTCAGTGACTCCAGCACATAGTCGATAAAAACATCTTGTTTTCATACCGCACTGTCAAAAATACTCTGAAAGGTGGGGTAACAATAAAAGACTGTTTCTATCATTGTTGTAGTTCTTTGCTGGCAGCCAAAGCTGATCCTAGAACAGTGATGAAGCGGTGCACGTCGCTAAAGGAGTTGTAGAGCGGCACCGGAGCGATGCGCAGAACGTTGGGTTCCCTCATGTCACAAGCAACACCCCTCTTCTCCAGCTCCTGGAATATGGCTGCGatggggacagagaaagagagggagagttggCAGCCTCGTTCCTCAGGGTGGGAGGGAGTGATGATATGGACGTAGGGCTTGTGAGGCTGGGACTCGTCCTTGTTGTAGTAGTGCTGGATCAGACACTCCAAGTAACCCGTCAGAAGTCTGGACTTCTTCCTCAGAGCTGCCATACTGGTCATAGCAAAGACCTGGACGTATTGACAAAGA

Function


NR:

description
kynureninase isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1753475 True 642 lncRNA 0.46 2 26264557 26267126

Neighbor


gene id symbol gene type direction distance location
lrp1ba LOC106574298 coding downstream 54178 26046428 ~ 26210379 (-)
si:ch211-246m6.5 LOC106574297 coding downstream 229622 25981440 ~ 26034935 (-)
si:ch211-246m6.4 LOC106574296 coding downstream 288154 25973670 ~ 25976403 (-)
aox5 LOC106574294 coding downstream 302928 25935277 ~ 25961629 (-)
s100b LOC106574292 coding downstream 424172 25838504 ~ 25840385 (-)
LOC110495928 LOC106574300 coding upstream 246494 26513620 ~ 26592195 (-)
LOC110495931 LOC106574302 coding upstream 797903 27065029 ~ 27083077 (-)
LOC110495932 LOC106574304 coding upstream 829854 27096980 ~ 27140487 (-)
LOC110495934 LOC106574305 coding upstream 885069 27152195 ~ 27156287 (-)
LOC110495935 fstl1 coding upstream 891852 27158978 ~ 27185448 (-)
G1531610 NA non-coding downstream 284845 25979310 ~ 25979712 (-)
G1531369 NA non-coding downstream 358504 25903787 ~ 25906053 (-)
G1531363 NA non-coding downstream 365679 25898665 ~ 25898878 (-)
G1531325 NA non-coding downstream 379383 25884882 ~ 25885174 (-)
G1531735 NA non-coding upstream 39670 26306796 ~ 26307115 (-)
G1531739 NA non-coding upstream 44870 26311996 ~ 26312231 (-)
G1531741 NA non-coding upstream 48093 26315219 ~ 26315625 (-)
G1531744 NA non-coding upstream 55656 26322782 ~ 26322991 (-)
G1531755 NA non-coding upstream 63821 26330947 ~ 26331174 (-)
G1531236 NA other downstream 555683 25696539 ~ 25708874 (-)
LOC110495915 NA other downstream 690886 25571910 ~ 25574981 (-)
G1531142 NA other downstream 741377 25519421 ~ 25523180 (-)
G1530967 LOC106574270 other downstream 1113563 25150068 ~ 25150994 (-)
G1529613 NA other downstream 1870873 24393375 ~ 24393684 (-)
G1533378 NA other upstream 920496 27187622 ~ 27189549 (-)
LOC110495948 LOC106574314 other upstream 1487048 27754174 ~ 27798978 (-)
LOC110496785 LOC106574363 other upstream 1593920 27839770 ~ 27914607 (-)
LOC110495955 LOC106574324 other upstream 1767838 27995381 ~ 28092196 (-)
LOC110495963 LOC106574327 other upstream 2084252 28241494 ~ 28368147 (-)

Expression



Co-expression Network