G1531908


Basic Information

Item Value
gene id G1531908
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 26448101 ~ 26448513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1753740
gaaaaataaataaataaaaaaaacagtatggggatgaggtaggtgaaaatgggtgggctatttaccaatagactatgtacagctgcagcgatcggttagctgctcagatagcagatgtttgaagttggtgagggagataaaagtctccagcttcagcgatttttgcaattcgttccagtcacaggcagcagagaactggaacgaaaggcggccaaatgaggtgttggctttagggatgatcagtgagatacacctgctggagcacgtgctacggatgggtgttgccatcgtaaccagtgaactgagataaggcggagctttacctagcatggacttgtagatgacctggagccagtgggtctggcgacgaatatgtagcgagggccagccgactagagcatacaagtcgcagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1753740 True 413 lncRNA 0.48 1 26448101 26448513

Neighbor

gene id symbol gene type direction distance location
kynu LOC106575231 coding upstream 180969 26253121 ~ 26267132 (+)
bzw1a LOC106574295 coding upstream 474782 25961717 ~ 25973319 (+)
LOC110496782 LOC106575224 coding upstream 513122 25930184 ~ 25943678 (+)
arl4ca LOC106574375 coding upstream 551655 25893317 ~ 25896446 (+)
sh3bp4a LOC106574293 coding upstream 563944 25858996 ~ 25884157 (+)
LOC110495930 LOC106574301 coding downstream 534468 26982981 ~ 27032712 (+)
LOC110495937 LOC106574307 coding downstream 797839 27246352 ~ 27256734 (+)
LOC110495939 LOC106574310 coding downstream 947005 27395518 ~ 27457227 (+)
LOC110495942 pknx1 coding downstream 1013926 27462439 ~ 27477815 (+)
LOC110495943 LOC106574311 coding downstream 1038783 27487296 ~ 27520483 (+)
G1531907 NA non-coding upstream 19 26447796 ~ 26448082 (+)
G1531890 NA non-coding upstream 9571 26438251 ~ 26438530 (+)
G1531762 NA non-coding upstream 107801 26340094 ~ 26340300 (+)
G1531761 NA non-coding upstream 109023 26338824 ~ 26339078 (+)
G1531595 NA non-coding upstream 140987 26306898 ~ 26307114 (+)
G1531911 NA non-coding downstream 416 26448929 ~ 26449362 (+)
G1531949 NA non-coding downstream 31834 26480347 ~ 26480564 (+)
G1531971 NA non-coding downstream 56419 26504932 ~ 26505207 (+)
G1531978 NA non-coding downstream 65135 26513648 ~ 26514901 (+)
G1531983 LOC106574300 non-coding downstream 84274 26532787 ~ 26589503 (+)
G1530923 LOC106574292 other upstream 608366 25838506 ~ 25840353 (+)
G1530785 NA other upstream 876755 25566471 ~ 25571346 (+)
LOC110495895 LOC106574270 other upstream 1292206 25133210 ~ 25157338 (+)
G1530367 NA other upstream 1442492 25004761 ~ 25005609 (+)
G1532307 NA other downstream 308856 26757369 ~ 26757677 (+)
LOC110495947 LOC106575089 other downstream 1188027 27629477 ~ 27750060 (+)
LOC110495958 LOC106574318 other downstream 1498565 27943362 ~ 27958807 (+)
G1533121 LOC106574322 other downstream 1526300 27974813 ~ 28038476 (+)
LOC110495972 NA other downstream 2284262 28732589 ~ 28735229 (+)

Expression


Co-expression Network