G1533418


Basic Information

Item Value
gene id G1533418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 27242825 ~ 27243377 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1755401
attagaatgtctatttttggataatactgttggccggttgcagttatctgttctctgtcagggttCAGTTACTTGGGCTGCAGAGAGGGGTGAGCTTGTcttcatgtgtaaacatatcttttaaaccatgttaaaggatgattgagggggaaccaattatctcttgactccacaatgtctgtgtgccagtcactgtgtctctgtgagcTTGTCCAGAATGGGAGTGTCTAAAATGACAATTGATATATATCCTAATGTCTTGGTACTAtgttgtaccaagaacgagaagtagaacCTCGTTTTAGGAgagcaaactgaacgataatttatagctaatgctgtctggctatggaatactcctctctcaagtaaagtcttcctttgtaatgttcctaagatctgttattcgtcatgtgagttgagatgggtgtgtcttggctataaatgatactaagaactgttttgtaagcactctcagagaattcatttatagacactgaattgatctgagagtcacagggttgtgatggagctcatataattaaagatggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1755401 True 553 lncRNA 0.39 1 27242825 27243377

Neighbor

gene id symbol gene type direction distance location
LOC110495936 LOC106574306 coding downstream 23352 27215066 ~ 27219473 (-)
LOC110495935 fstl1 coding downstream 57377 27158978 ~ 27185448 (-)
LOC110495934 LOC106574305 coding downstream 86538 27152195 ~ 27156287 (-)
LOC110495932 LOC106574304 coding downstream 102338 27096980 ~ 27140487 (-)
LOC110495931 LOC106574302 coding downstream 159748 27065029 ~ 27083077 (-)
LOC110495938 LOC106574308 coding upstream 14109 27257486 ~ 27364364 (-)
LOC110495941 LOC100196748 coding upstream 145332 27388709 ~ 27395340 (-)
LOC118941127 NA coding upstream 280482 27523859 ~ 27526447 (-)
LOC110495945 LOC106574379 coding upstream 330154 27573531 ~ 27607434 (-)
LOC110495948 LOC106574314 coding upstream 510981 27754174 ~ 27798978 (-)
G1533415 NA non-coding downstream 2007 27240610 ~ 27240818 (-)
G1533388 NA non-coding downstream 35253 27196603 ~ 27207572 (-)
G1533387 NA non-coding downstream 46709 27195835 ~ 27196116 (-)
G1533383 NA non-coding downstream 49447 27193158 ~ 27193378 (-)
G1533380 NA non-coding downstream 52852 27189622 ~ 27189973 (-)
G1533419 NA non-coding upstream 20602 27263979 ~ 27264180 (-)
G1533420 NA non-coding upstream 21248 27264625 ~ 27264846 (-)
G1533424 NA non-coding upstream 33051 27276428 ~ 27276700 (-)
G1533437 NA non-coding upstream 54612 27297989 ~ 27298441 (-)
G1533452 NA non-coding upstream 68361 27311738 ~ 27312047 (-)
G1533378 NA other downstream 53276 27187622 ~ 27189549 (-)
G1531236 NA other downstream 1533951 25696539 ~ 25708874 (-)
LOC110495915 NA other downstream 1669154 25571910 ~ 25574981 (-)
G1531142 NA other downstream 1719645 25519421 ~ 25523180 (-)
G1530967 LOC106574270 other downstream 2091831 25150068 ~ 25150994 (-)
LOC110496785 LOC106574363 other upstream 617669 27839770 ~ 27914607 (-)
LOC110495955 LOC106574324 other upstream 791587 27995381 ~ 28092196 (-)
LOC110495963 LOC106574327 other upstream 1108001 28241494 ~ 28368147 (-)
G1536703 NA other upstream 3040995 30284372 ~ 30284762 (-)

Expression


Co-expression Network