Gene
RNA
| Item | Value |
|---|---|
| gene id | G1533419 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 27263979 ~ 27264180 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107675252 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1755402 | True | 202 | lncRNA | 0.45 | 1 | 27263979 | 27264180 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495936 | LOC106574306 | coding | downstream | 44506 | 27215066 ~ 27219473 (-) |
| LOC110495935 | fstl1 | coding | downstream | 78531 | 27158978 ~ 27185448 (-) |
| LOC110495934 | LOC106574305 | coding | downstream | 107692 | 27152195 ~ 27156287 (-) |
| LOC110495932 | LOC106574304 | coding | downstream | 123492 | 27096980 ~ 27140487 (-) |
| LOC110495931 | LOC106574302 | coding | downstream | 180902 | 27065029 ~ 27083077 (-) |
| LOC110495941 | LOC100196748 | coding | upstream | 124529 | 27388709 ~ 27395340 (-) |
| LOC118941127 | NA | coding | upstream | 259679 | 27523859 ~ 27526447 (-) |
| LOC110495945 | LOC106574379 | coding | upstream | 309351 | 27573531 ~ 27607434 (-) |
| LOC110495948 | LOC106574314 | coding | upstream | 490178 | 27754174 ~ 27798978 (-) |
| cpb2 | cpb2 | coding | upstream | 543994 | 27808174 ~ 27819821 (-) |
| G1533418 | NA | non-coding | downstream | 20602 | 27242825 ~ 27243377 (-) |
| G1533415 | NA | non-coding | downstream | 23161 | 27240610 ~ 27240818 (-) |
| G1533388 | NA | non-coding | downstream | 56407 | 27196603 ~ 27207572 (-) |
| G1533387 | NA | non-coding | downstream | 67863 | 27195835 ~ 27196116 (-) |
| G1533383 | NA | non-coding | downstream | 70601 | 27193158 ~ 27193378 (-) |
| G1533420 | NA | non-coding | upstream | 445 | 27264625 ~ 27264846 (-) |
| G1533424 | NA | non-coding | upstream | 12248 | 27276428 ~ 27276700 (-) |
| G1533437 | NA | non-coding | upstream | 33809 | 27297989 ~ 27298441 (-) |
| G1533452 | NA | non-coding | upstream | 47558 | 27311738 ~ 27312047 (-) |
| G1533462 | LOC106611372 | non-coding | upstream | 58515 | 27322695 ~ 27322991 (-) |
| G1533378 | NA | other | downstream | 74430 | 27187622 ~ 27189549 (-) |
| G1531236 | NA | other | downstream | 1555105 | 25696539 ~ 25708874 (-) |
| LOC110495915 | NA | other | downstream | 1690308 | 25571910 ~ 25574981 (-) |
| G1531142 | NA | other | downstream | 1740799 | 25519421 ~ 25523180 (-) |
| G1530967 | LOC106574270 | other | downstream | 2112985 | 25150068 ~ 25150994 (-) |
| LOC110496785 | LOC106574363 | other | upstream | 596866 | 27839770 ~ 27914607 (-) |
| LOC110495955 | LOC106574324 | other | upstream | 770784 | 27995381 ~ 28092196 (-) |
| LOC110495963 | LOC106574327 | other | upstream | 1087198 | 28241494 ~ 28368147 (-) |
| G1536703 | NA | other | upstream | 3020192 | 30284372 ~ 30284762 (-) |
