Gene
RNA
| Item | Value |
|---|---|
| gene id | G1533424 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 27276428 ~ 27276700 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1755407 | True | 273 | lncRNA | 0.45 | 1 | 27276428 | 27276700 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495936 | LOC106574306 | coding | downstream | 56955 | 27215066 ~ 27219473 (-) |
| LOC110495935 | fstl1 | coding | downstream | 90980 | 27158978 ~ 27185448 (-) |
| LOC110495934 | LOC106574305 | coding | downstream | 120141 | 27152195 ~ 27156287 (-) |
| LOC110495932 | LOC106574304 | coding | downstream | 135941 | 27096980 ~ 27140487 (-) |
| LOC110495931 | LOC106574302 | coding | downstream | 193351 | 27065029 ~ 27083077 (-) |
| LOC110495941 | LOC100196748 | coding | upstream | 112009 | 27388709 ~ 27395340 (-) |
| LOC118941127 | NA | coding | upstream | 247159 | 27523859 ~ 27526447 (-) |
| LOC110495945 | LOC106574379 | coding | upstream | 296831 | 27573531 ~ 27607434 (-) |
| LOC110495948 | LOC106574314 | coding | upstream | 477658 | 27754174 ~ 27798978 (-) |
| cpb2 | cpb2 | coding | upstream | 531474 | 27808174 ~ 27819821 (-) |
| G1533420 | NA | non-coding | downstream | 11582 | 27264625 ~ 27264846 (-) |
| G1533419 | NA | non-coding | downstream | 12248 | 27263979 ~ 27264180 (-) |
| G1533418 | NA | non-coding | downstream | 33051 | 27242825 ~ 27243377 (-) |
| G1533415 | NA | non-coding | downstream | 35610 | 27240610 ~ 27240818 (-) |
| G1533388 | NA | non-coding | downstream | 68856 | 27196603 ~ 27207572 (-) |
| G1533437 | NA | non-coding | upstream | 21289 | 27297989 ~ 27298441 (-) |
| G1533452 | NA | non-coding | upstream | 35038 | 27311738 ~ 27312047 (-) |
| G1533462 | LOC106611372 | non-coding | upstream | 45995 | 27322695 ~ 27322991 (-) |
| G1533465 | NA | non-coding | upstream | 47582 | 27324282 ~ 27324554 (-) |
| G1533468 | NA | non-coding | upstream | 50124 | 27326824 ~ 27327071 (-) |
| G1533378 | NA | other | downstream | 86879 | 27187622 ~ 27189549 (-) |
| G1531236 | NA | other | downstream | 1567554 | 25696539 ~ 25708874 (-) |
| LOC110495915 | NA | other | downstream | 1702757 | 25571910 ~ 25574981 (-) |
| G1531142 | NA | other | downstream | 1753248 | 25519421 ~ 25523180 (-) |
| G1530967 | LOC106574270 | other | downstream | 2125434 | 25150068 ~ 25150994 (-) |
| LOC110496785 | LOC106574363 | other | upstream | 584346 | 27839770 ~ 27914607 (-) |
| LOC110495955 | LOC106574324 | other | upstream | 758264 | 27995381 ~ 28092196 (-) |
| LOC110495963 | LOC106574327 | other | upstream | 1074678 | 28241494 ~ 28368147 (-) |
| G1536703 | NA | other | upstream | 3007672 | 30284372 ~ 30284762 (-) |
