Gene
RNA
| Item | Value |
|---|---|
| gene id | G1533477 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 27339456 ~ 27339693 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1755465 | True | 238 | lncRNA | 0.39 | 1 | 27339456 | 27339693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495936 | LOC106574306 | coding | downstream | 119983 | 27215066 ~ 27219473 (-) |
| LOC110495935 | fstl1 | coding | downstream | 154008 | 27158978 ~ 27185448 (-) |
| LOC110495934 | LOC106574305 | coding | downstream | 183169 | 27152195 ~ 27156287 (-) |
| LOC110495932 | LOC106574304 | coding | downstream | 198969 | 27096980 ~ 27140487 (-) |
| LOC110495931 | LOC106574302 | coding | downstream | 256379 | 27065029 ~ 27083077 (-) |
| LOC110495941 | LOC100196748 | coding | upstream | 49016 | 27388709 ~ 27395340 (-) |
| LOC118941127 | NA | coding | upstream | 184166 | 27523859 ~ 27526447 (-) |
| LOC110495945 | LOC106574379 | coding | upstream | 233838 | 27573531 ~ 27607434 (-) |
| LOC110495948 | LOC106574314 | coding | upstream | 414665 | 27754174 ~ 27798978 (-) |
| cpb2 | cpb2 | coding | upstream | 468481 | 27808174 ~ 27819821 (-) |
| G1533473 | NA | non-coding | downstream | 6622 | 27332563 ~ 27332834 (-) |
| G1533442 | NA | non-coding | downstream | 8932 | 27330257 ~ 27330524 (-) |
| G1533468 | NA | non-coding | downstream | 12385 | 27326824 ~ 27327071 (-) |
| G1533465 | NA | non-coding | downstream | 14902 | 27324282 ~ 27324554 (-) |
| G1533462 | LOC106611372 | non-coding | downstream | 16465 | 27322695 ~ 27322991 (-) |
| G1533550 | LOC106574310 | non-coding | upstream | 108843 | 27448536 ~ 27449146 (-) |
| G1533549 | LOC106575085 | non-coding | upstream | 135603 | 27475296 ~ 27475888 (-) |
| G1533563 | NA | non-coding | upstream | 136592 | 27476285 ~ 27476547 (-) |
| G1533584 | NA | non-coding | upstream | 162953 | 27502646 ~ 27588350 (-) |
| G1533579 | NA | non-coding | upstream | 199373 | 27539066 ~ 27579929 (-) |
| G1533378 | NA | other | downstream | 149907 | 27187622 ~ 27189549 (-) |
| G1531236 | NA | other | downstream | 1630582 | 25696539 ~ 25708874 (-) |
| LOC110495915 | NA | other | downstream | 1765785 | 25571910 ~ 25574981 (-) |
| G1531142 | NA | other | downstream | 1816276 | 25519421 ~ 25523180 (-) |
| G1530967 | LOC106574270 | other | downstream | 2188462 | 25150068 ~ 25150994 (-) |
| LOC110496785 | LOC106574363 | other | upstream | 521353 | 27839770 ~ 27914607 (-) |
| LOC110495955 | LOC106574324 | other | upstream | 695271 | 27995381 ~ 28092196 (-) |
| LOC110495963 | LOC106574327 | other | upstream | 1011685 | 28241494 ~ 28368147 (-) |
| G1536703 | NA | other | upstream | 2944679 | 30284372 ~ 30284762 (-) |
