G1532837


Basic Information

Item Value
gene id G1532837
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 27476281 ~ 27476540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1754755
GGGACGAAAGCCCAACCTCCTGATACCTCAAATTTTCTCCCCACATGGCCTACTAGCATTTTATACCGCTGTGATTAATGGTCCCCGTGGTGCCCACAAACGTTGCATGATAGCAGGTCAAGTAACAGAGGAATTGGGTAAAAAGGTATCCAACTAGTGGCCAGACTTTATTTAATCATCATCCTGTGCTGTTCCCATACATTGACCTTTAGTCTTACATCATCCATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1754755 True 229 lncRNA 0.45 2 27476281 27476540

Neighbor

gene id symbol gene type direction distance location
LOC110495939 LOC106574310 coding upstream 19054 27395518 ~ 27457227 (+)
LOC110495937 LOC106574307 coding upstream 219547 27246352 ~ 27256734 (+)
LOC110495930 LOC106574301 coding upstream 443569 26982981 ~ 27032712 (+)
kynu LOC106575231 coding upstream 1209149 26253121 ~ 26267132 (+)
bzw1a LOC106574295 coding upstream 1502962 25961717 ~ 25973319 (+)
LOC110495943 LOC106574311 coding downstream 10756 27487296 ~ 27520483 (+)
LOC110495944 LOC106574312 coding downstream 49912 27526452 ~ 27548466 (+)
LOC118941128 NA coding downstream 79863 27556403 ~ 27567412 (+)
LOC110495947 LOC106575089 coding downstream 152937 27629477 ~ 27750060 (+)
alg11 alg11 coding downstream 344028 27820568 ~ 27829342 (+)
G1532827 NA non-coding upstream 23340 27452458 ~ 27452941 (+)
G1532803 NA non-coding upstream 91417 27384550 ~ 27384864 (+)
G1532773 NA non-coding upstream 137184 27338834 ~ 27339097 (+)
G1532769 NA non-coding upstream 145565 27330229 ~ 27330716 (+)
G1532766 NA non-coding upstream 151236 27324788 ~ 27325045 (+)
G1532920 NA non-coding downstream 328715 27805255 ~ 27810891 (+)
LOC110495952 NA non-coding downstream 353539 27829955 ~ 27843859 (+)
G1533033 NA non-coding downstream 373924 27850464 ~ 27851051 (+)
G1533099 NA non-coding downstream 445065 27921605 ~ 27923875 (+)
si:dkey-1h24.6 LOC106574316 non-coding downstream 449752 27925782 ~ 27931338 (+)
G1532307 NA other upstream 718604 26757369 ~ 26757677 (+)
LOC110496782 LOC106575224 other upstream 1532603 25930184 ~ 25943678 (+)
G1530923 LOC106574292 other upstream 1636546 25838506 ~ 25840353 (+)
G1530785 NA other upstream 1904935 25566471 ~ 25571346 (+)
LOC110495895 LOC106574270 other upstream 2320386 25133210 ~ 25157338 (+)
LOC110495958 LOC106574318 other downstream 470538 27943362 ~ 27958807 (+)
G1533121 LOC106574322 other downstream 498273 27974813 ~ 28038476 (+)
LOC110495972 NA other downstream 1256235 28732589 ~ 28735229 (+)
G1534488 LOC106574337 other downstream 1327488 28804028 ~ 28804673 (+)

Expression


Co-expression Network