Gene
RNA
| Item | Value |
|---|---|
| gene id | G1533563 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 27476285 ~ 27476547 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1755556 | True | 232 | lncRNA | 0.44 | 2 | 27476285 | 27476547 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495941 | LOC100196748 | coding | downstream | 80945 | 27388709 ~ 27395340 (-) |
| LOC110495938 | LOC106574308 | coding | downstream | 111921 | 27257486 ~ 27364364 (-) |
| LOC110495936 | LOC106574306 | coding | downstream | 256812 | 27215066 ~ 27219473 (-) |
| LOC110495935 | fstl1 | coding | downstream | 290837 | 27158978 ~ 27185448 (-) |
| LOC110495934 | LOC106574305 | coding | downstream | 319998 | 27152195 ~ 27156287 (-) |
| LOC118941127 | NA | coding | upstream | 47312 | 27523859 ~ 27526447 (-) |
| LOC110495945 | LOC106574379 | coding | upstream | 96984 | 27573531 ~ 27607434 (-) |
| LOC110495948 | LOC106574314 | coding | upstream | 277811 | 27754174 ~ 27798978 (-) |
| cpb2 | cpb2 | coding | upstream | 331627 | 27808174 ~ 27819821 (-) |
| LOC110496785 | LOC106574363 | coding | upstream | 363223 | 27839770 ~ 27914607 (-) |
| G1533549 | LOC106575085 | non-coding | downstream | 397 | 27475296 ~ 27475888 (-) |
| G1533550 | LOC106574310 | non-coding | downstream | 27139 | 27448536 ~ 27449146 (-) |
| G1533477 | NA | non-coding | downstream | 136592 | 27339456 ~ 27339693 (-) |
| G1533473 | NA | non-coding | downstream | 143451 | 27332563 ~ 27332834 (-) |
| G1533442 | NA | non-coding | downstream | 145761 | 27330257 ~ 27330524 (-) |
| G1533584 | NA | non-coding | upstream | 26099 | 27502646 ~ 27588350 (-) |
| G1533579 | NA | non-coding | upstream | 62519 | 27539066 ~ 27579929 (-) |
| G1533568 | NA | non-coding | upstream | 66238 | 27542785 ~ 27544206 (-) |
| G1533679 | NA | non-coding | upstream | 177665 | 27654212 ~ 27654522 (-) |
| G1533680 | NA | non-coding | upstream | 178263 | 27654810 ~ 27655059 (-) |
| G1533378 | NA | other | downstream | 286736 | 27187622 ~ 27189549 (-) |
| G1531236 | NA | other | downstream | 1767411 | 25696539 ~ 25708874 (-) |
| LOC110495915 | NA | other | downstream | 1902614 | 25571910 ~ 25574981 (-) |
| G1531142 | NA | other | downstream | 1953105 | 25519421 ~ 25523180 (-) |
| G1530967 | LOC106574270 | other | downstream | 2325291 | 25150068 ~ 25150994 (-) |
| LOC110495955 | LOC106574324 | other | upstream | 558417 | 27995381 ~ 28092196 (-) |
| LOC110495963 | LOC106574327 | other | upstream | 874831 | 28241494 ~ 28368147 (-) |
| G1536703 | NA | other | upstream | 2807825 | 30284372 ~ 30284762 (-) |
