G1533568


Basic Information

Item Value
gene id G1533568
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 27542785 ~ 27544206 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1755561
GGGGCTTGATAGCGGGACCGGGGAAACTGCCCTCCTTCTCATAGTGCTCCTGCAGTGCATCCTTCCGCTGGTAGAGCTTGTGAAGCCAGGTTGCACACTCCTTCTCGTCCTCTGGGATTTCCTCCACTGGGTACCGTGATATTCATATCTGCCATGTACTTCTTTCCACTGACGATTCCCAGCAGTGTTGGGACCTTCTTGTCTCTGAAATTTAGTGTCACGTCGTACACAGCAGATACTGTGCCTTTGAGACAGCTCAGTGTTGTGGTGAAGCCTTTGGTTCTGGGCAGTAGATGGTATTTGAGTTTTGGTAGACCTTTACTCTCTGCTACCTCCATACTGATCTCATGCTTCTTCGGTGTGAAACGGGTGCCTTCACAGTACAATAGGaaCCACATAAACTCAGGGTAATCCTTCAGCTGGGTCAGGCCTTTGAACACGGtatctctgtcctcctcccactTCCTCTTACAGAATACAATCTCCAGGAAGTACCATGTCCAGCC

Function

NR:

description
1-acyl-sn-glycerol-3-phosphate acyltransferase gamma-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1755561 True 506 lncRNA 0.50 5 27542785 27544206

Neighbor

gene id symbol gene type direction distance location
LOC118941127 NA coding downstream 16338 27523859 ~ 27526447 (-)
LOC110495941 LOC100196748 coding downstream 147445 27388709 ~ 27395340 (-)
LOC110495938 LOC106574308 coding downstream 178421 27257486 ~ 27364364 (-)
LOC110495936 LOC106574306 coding downstream 323312 27215066 ~ 27219473 (-)
LOC110495935 fstl1 coding downstream 357337 27158978 ~ 27185448 (-)
LOC110495945 LOC106574379 coding upstream 29325 27573531 ~ 27607434 (-)
LOC110495948 LOC106574314 coding upstream 210152 27754174 ~ 27798978 (-)
cpb2 cpb2 coding upstream 263968 27808174 ~ 27819821 (-)
LOC110496785 LOC106574363 coding upstream 295564 27839770 ~ 27914607 (-)
LOC110495957 LOC106574318 coding upstream 404572 27948778 ~ 27974405 (-)
G1533563 NA non-coding downstream 66238 27476285 ~ 27476547 (-)
G1533549 LOC106575085 non-coding downstream 66897 27475296 ~ 27475888 (-)
G1533550 LOC106574310 non-coding downstream 93639 27448536 ~ 27449146 (-)
G1533477 NA non-coding downstream 203092 27339456 ~ 27339693 (-)
G1533473 NA non-coding downstream 209951 27332563 ~ 27332834 (-)
G1533679 NA non-coding upstream 110006 27654212 ~ 27654522 (-)
G1533680 NA non-coding upstream 110604 27654810 ~ 27655059 (-)
G1533685 NA non-coding upstream 114336 27658542 ~ 27658742 (-)
G1533686 NA non-coding upstream 114790 27658996 ~ 27659277 (-)
G1533722 NA non-coding upstream 168380 27712586 ~ 27712992 (-)
G1533378 NA other downstream 353236 27187622 ~ 27189549 (-)
G1531236 NA other downstream 1833911 25696539 ~ 25708874 (-)
LOC110495915 NA other downstream 1969114 25571910 ~ 25574981 (-)
G1531142 NA other downstream 2019605 25519421 ~ 25523180 (-)
G1530967 LOC106574270 other downstream 2391791 25150068 ~ 25150994 (-)
LOC110495955 LOC106574324 other upstream 490758 27995381 ~ 28092196 (-)
LOC110495963 LOC106574327 other upstream 807172 28241494 ~ 28368147 (-)
G1536703 NA other upstream 2740166 30284372 ~ 30284762 (-)

Expression


Co-expression Network