Gene
RNA
| Item | Value |
|---|---|
| gene id | G1533722 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 27712586 ~ 27712992 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1755738 | True | 355 | lncRNA | 0.48 | 2 | 27712586 | 27712992 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495945 | LOC106574379 | coding | downstream | 105152 | 27573531 ~ 27607434 (-) |
| LOC118941127 | NA | coding | downstream | 186139 | 27523859 ~ 27526447 (-) |
| LOC110495941 | LOC100196748 | coding | downstream | 317246 | 27388709 ~ 27395340 (-) |
| LOC110495938 | LOC106574308 | coding | downstream | 348222 | 27257486 ~ 27364364 (-) |
| LOC110495936 | LOC106574306 | coding | downstream | 493113 | 27215066 ~ 27219473 (-) |
| LOC110495948 | LOC106574314 | coding | upstream | 41366 | 27754174 ~ 27798978 (-) |
| cpb2 | cpb2 | coding | upstream | 95182 | 27808174 ~ 27819821 (-) |
| LOC110496785 | LOC106574363 | coding | upstream | 126778 | 27839770 ~ 27914607 (-) |
| LOC110495957 | LOC106574318 | coding | upstream | 235786 | 27948778 ~ 27974405 (-) |
| prkag3a | LOC106575098 | coding | upstream | 261816 | 27974808 ~ 27982705 (-) |
| G1533686 | NA | non-coding | downstream | 53309 | 27658996 ~ 27659277 (-) |
| G1533685 | NA | non-coding | downstream | 53844 | 27658542 ~ 27658742 (-) |
| G1533680 | NA | non-coding | downstream | 57527 | 27654810 ~ 27655059 (-) |
| G1533679 | NA | non-coding | downstream | 58064 | 27654212 ~ 27654522 (-) |
| G1533579 | NA | non-coding | downstream | 132657 | 27539066 ~ 27579929 (-) |
| G1533783 | NA | non-coding | upstream | 117981 | 27830973 ~ 27833037 (-) |
| G1533845 | NA | non-coding | upstream | 213300 | 27926292 ~ 27926680 (-) |
| G1533860 | NA | non-coding | upstream | 232677 | 27945669 ~ 27945957 (-) |
| LOC110495955 | LOC106574324 | non-coding | upstream | 328941 | 27995381 ~ 28092196 (-) |
| LOC110495961 | LOC106574325 | non-coding | upstream | 411620 | 28124599 ~ 28199758 (-) |
| G1533378 | NA | other | downstream | 523037 | 27187622 ~ 27189549 (-) |
| G1531236 | NA | other | downstream | 2003712 | 25696539 ~ 25708874 (-) |
| LOC110495915 | NA | other | downstream | 2138915 | 25571910 ~ 25574981 (-) |
| G1531142 | NA | other | downstream | 2189406 | 25519421 ~ 25523180 (-) |
| G1530967 | LOC106574270 | other | downstream | 2561592 | 25150068 ~ 25150994 (-) |
| LOC110495963 | LOC106574327 | other | upstream | 638386 | 28241494 ~ 28368147 (-) |
| G1536703 | NA | other | upstream | 2571380 | 30284372 ~ 30284762 (-) |
