Gene
RNA
| Item | Value |
|---|---|
| gene id | G1533099 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 27921605 ~ 27923875 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| CD28-like protein, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1755050 | True | 530 | lncRNA | 0.47 | 2 | 27921605 | 27923875 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495952 | NA | coding | upstream | 89700 | 27829955 ~ 27843859 (+) |
| alg11 | alg11 | coding | upstream | 92263 | 27820568 ~ 27829342 (+) |
| LOC110495947 | LOC106575089 | coding | upstream | 171545 | 27629477 ~ 27750060 (+) |
| LOC118941128 | NA | coding | upstream | 354193 | 27556403 ~ 27567412 (+) |
| LOC110495944 | LOC106574312 | coding | upstream | 373139 | 27526452 ~ 27548466 (+) |
| si:dkey-1h24.6 | LOC106574316 | coding | downstream | 1907 | 27925782 ~ 27931338 (+) |
| LOC118941047 | mdh1b | coding | downstream | 14157 | 27938032 ~ 27940798 (+) |
| LOC110495958 | LOC106574318 | coding | downstream | 19498 | 27943362 ~ 27958807 (+) |
| LOC110496786 | NA | coding | downstream | 550474 | 28474349 ~ 28479668 (+) |
| LOC110495966 | LOC106575106 | coding | downstream | 597605 | 28521480 ~ 28595208 (+) |
| G1533033 | NA | non-coding | upstream | 70554 | 27850464 ~ 27851051 (+) |
| G1532920 | NA | non-coding | upstream | 110714 | 27805255 ~ 27810891 (+) |
| G1532837 | NA | non-coding | upstream | 445065 | 27476281 ~ 27476540 (+) |
| G1532827 | NA | non-coding | upstream | 468664 | 27452458 ~ 27452941 (+) |
| G1533122 | NA | non-coding | downstream | 54242 | 27978117 ~ 27981282 (+) |
| G1533123 | NA | non-coding | downstream | 56107 | 27979982 ~ 27980618 (+) |
| G1533060 | LOC106574321 | non-coding | downstream | 61596 | 27985471 ~ 27988152 (+) |
| G1532307 | NA | other | upstream | 1163928 | 26757369 ~ 26757677 (+) |
| LOC110496782 | LOC106575224 | other | upstream | 1977927 | 25930184 ~ 25943678 (+) |
| G1530923 | LOC106574292 | other | upstream | 2081870 | 25838506 ~ 25840353 (+) |
| G1530785 | NA | other | upstream | 2350259 | 25566471 ~ 25571346 (+) |
| G1533121 | LOC106574322 | other | downstream | 50938 | 27974813 ~ 28038476 (+) |
| LOC110495972 | NA | other | downstream | 808900 | 28732589 ~ 28735229 (+) |
| G1534488 | LOC106574337 | other | downstream | 880153 | 28804028 ~ 28804673 (+) |
| G1534495 | NA | other | downstream | 888954 | 28812829 ~ 28813103 (+) |
