G1534385


Basic Information

Item Value
gene id G1534385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 28616282 ~ 28616493 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1756442
TCTGGGTATTAGCTATATAAACTGTGCATTGTCTGTAAAAGGAAGGCTCTCAGCCTAACAGTCAAGACTGTTGGGCTGACtgtttcattattgcaataattaaatCGCTATTAAATAAGTATGATTGTTTGAAGAGATgaccaagtctctctcagtactcAATTTACACTACACATCtcattcaaaatcatgggcattaatatggaattggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1756442 True 212 lncRNA 0.35 1 28616282 28616493

Neighbor

gene id symbol gene type direction distance location
LOC110495966 LOC106575106 coding upstream 21074 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 136614 28474349 ~ 28479668 (+)
LOC110495958 LOC106574318 coding upstream 669105 27943362 ~ 27958807 (+)
LOC118941047 mdh1b coding upstream 675484 27938032 ~ 27940798 (+)
si:dkey-1h24.6 LOC106574316 coding upstream 684944 27925782 ~ 27931338 (+)
LOC110496787 LOC106575108 coding downstream 17318 28633811 ~ 28644214 (+)
LOC110495968 LOC106574333 coding downstream 30088 28646581 ~ 28672693 (+)
LOC110495972 NA coding downstream 116096 28732589 ~ 28735229 (+)
zgc:174945 LOC106574385 coding downstream 1565739 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 1617198 30233691 ~ 30254904 (+)
G1534380 NA non-coding upstream 5120 28610928 ~ 28611162 (+)
G1534330 NA non-coding upstream 18976 28595646 ~ 28597306 (+)
G1534339 NA non-coding upstream 100323 28512018 ~ 28515959 (+)
G1534194 NA non-coding upstream 229988 28386030 ~ 28386294 (+)
G1534173 NA non-coding upstream 245833 28369831 ~ 28370449 (+)
G1534388 NA non-coding downstream 1730 28618223 ~ 28618476 (+)
G1534403 LOC106574334 non-coding downstream 56345 28672838 ~ 28676035 (+)
G1534414 NA non-coding downstream 57472 28673965 ~ 28674547 (+)
G1533121 LOC106574322 other upstream 577806 27974813 ~ 28038476 (+)
LOC110495947 LOC106575089 other upstream 964457 27629477 ~ 27750060 (+)
G1532307 NA other upstream 1858605 26757369 ~ 26757677 (+)
LOC110496782 LOC106575224 other upstream 2672604 25930184 ~ 25943678 (+)
G1534488 LOC106574337 other downstream 187535 28804028 ~ 28804673 (+)
G1534495 NA other downstream 196336 28812829 ~ 28813103 (+)
G1536720 NA other downstream 1680638 30297131 ~ 30297346 (+)
G1537251 NA other downstream 2206015 30822508 ~ 30828046 (+)

Expression


Co-expression Network