G1534388


Basic Information

Item Value
gene id G1534388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 28618223 ~ 28618476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1756445
TATTGGAGTCCAAATGGAGAGGGATGCCCTTGGGGCCAACTGCTTTAGGGCCAATGTGGAGCCAATGAGCAAAGGTGCATTGGCCCAACGTGGGCAACCTACATGGGGCCAATATTTTAGCCTGCATTGGGCCCAGGAGTAGGGAGTCCACACCCATGATTTTTCCAGGTCTAATGCAGAGCTTTTCAAAGGAAAAGAAGACAAACCTGCAGTGCAGACTGGCACCTTCAGTAATGGATTTTGACACCTGTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1756445 True 254 lncRNA 0.50 1 28618223 28618476

Neighbor

gene id symbol gene type direction distance location
LOC110495966 LOC106575106 coding upstream 23015 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 138555 28474349 ~ 28479668 (+)
LOC110495958 LOC106574318 coding upstream 671046 27943362 ~ 27958807 (+)
LOC118941047 mdh1b coding upstream 677425 27938032 ~ 27940798 (+)
si:dkey-1h24.6 LOC106574316 coding upstream 686885 27925782 ~ 27931338 (+)
LOC110496787 LOC106575108 coding downstream 15335 28633811 ~ 28644214 (+)
LOC110495968 LOC106574333 coding downstream 28105 28646581 ~ 28672693 (+)
LOC110495972 NA coding downstream 114113 28732589 ~ 28735229 (+)
zgc:174945 LOC106574385 coding downstream 1563756 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 1615215 30233691 ~ 30254904 (+)
G1534385 NA non-coding upstream 1730 28616282 ~ 28616493 (+)
G1534380 NA non-coding upstream 7061 28610928 ~ 28611162 (+)
G1534330 NA non-coding upstream 20917 28595646 ~ 28597306 (+)
G1534339 NA non-coding upstream 102264 28512018 ~ 28515959 (+)
G1534194 NA non-coding upstream 231929 28386030 ~ 28386294 (+)
G1534403 LOC106574334 non-coding downstream 54362 28672838 ~ 28676035 (+)
G1534414 NA non-coding downstream 55489 28673965 ~ 28674547 (+)
G1534455 NA non-coding downstream 142497 28760973 ~ 28761471 (+)
G1533121 LOC106574322 other upstream 579747 27974813 ~ 28038476 (+)
LOC110495947 LOC106575089 other upstream 966398 27629477 ~ 27750060 (+)
G1532307 NA other upstream 1860546 26757369 ~ 26757677 (+)
LOC110496782 LOC106575224 other upstream 2674545 25930184 ~ 25943678 (+)
G1534488 LOC106574337 other downstream 185552 28804028 ~ 28804673 (+)
G1534495 NA other downstream 194353 28812829 ~ 28813103 (+)
G1536720 NA other downstream 1678655 30297131 ~ 30297346 (+)
G1537251 NA other downstream 2204032 30822508 ~ 30828046 (+)

Expression


Co-expression Network