G1534465


Basic Information

Item Value
gene id G1534465
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 28777790 ~ 28778162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1756547
tttgattttgatttggtaTTTTCTTGGTGCTGCGCATCTGACAAATACACATGTAAACACCAAGTGTTTTTTCAacttcagtgtgtgtatgtggattCCCTTACCTCATCTTGGTGAAGTTGCCTATCACTCTGATGCAGCCGGTGCTGTCCCCTCCACAGATGCCACACTTGTCAAACTGCAGCTTGGAGCCGATGATGCCGTCACAGCCGGTACGCACACACTTGCCcttcacacacactgagctgctgTACGGTCGACATTCTGTCCCGTCCACCACCTGGAGAAGGAGATATTAGCAtattggttgttgttgttgttgtagtcttCATCATCATAGAGGCTCGCCTCGTAGGAGATTGTTGCTGATTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1756547 True 373 lncRNA 0.47 1 28777790 28778162

Neighbor

gene id symbol gene type direction distance location
LOC110495972 NA coding upstream 42561 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 105097 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 133694 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 182582 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 298122 28474349 ~ 28479668 (+)
zgc:174945 LOC106574385 coding downstream 1404070 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 1455529 30233691 ~ 30254904 (+)
LOC118940974 LOC108266561 coding downstream 1740458 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 1756852 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 1948645 30726807 ~ 30749687 (+)
G1534461 LOC106574337 non-coding upstream 3251 28771301 ~ 28774539 (+)
G1534458 NA non-coding upstream 8736 28768816 ~ 28769054 (+)
G1534456 NA non-coding upstream 15021 28761592 ~ 28762769 (+)
G1534455 NA non-coding upstream 16319 28760973 ~ 28761471 (+)
G1534403 LOC106574334 non-coding upstream 101755 28672838 ~ 28676035 (+)
G1534466 NA non-coding downstream 138 28778300 ~ 28778591 (+)
G1534468 NA non-coding downstream 1635 28779797 ~ 28781843 (+)
G1534476 adamts5 non-coding downstream 10687 28788849 ~ 28789147 (+)
G1534477 NA non-coding downstream 11373 28789535 ~ 28789805 (+)
G1534478 NA non-coding downstream 11836 28789998 ~ 28791123 (+)
G1533121 LOC106574322 other upstream 739314 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 827568 27943362 ~ 27958807 (+)
LOC110495947 LOC106575089 other upstream 1125965 27629477 ~ 27750060 (+)
G1532307 NA other upstream 2020113 26757369 ~ 26757677 (+)
G1534488 LOC106574337 other downstream 25866 28804028 ~ 28804673 (+)
G1534495 NA other downstream 34667 28812829 ~ 28813103 (+)
G1536720 NA other downstream 1518969 30297131 ~ 30297346 (+)
G1537251 NA other downstream 2044346 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 2790729 31568375 ~ 31572239 (+)

Expression


Co-expression Network