Gene
RNA
| Item | Value |
|---|---|
| gene id | G1534478 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 28789998 ~ 28791123 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| A disintegrin and metalloproteinase with thrombospondin motifs 5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1756560 | True | 1126 | lncRNA | 0.44 | 1 | 28789998 | 28791123 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495972 | NA | coding | upstream | 54769 | 28732589 ~ 28735229 (+) |
| LOC110495968 | LOC106574333 | coding | upstream | 117305 | 28646581 ~ 28672693 (+) |
| LOC110496787 | LOC106575108 | coding | upstream | 145902 | 28633811 ~ 28644214 (+) |
| LOC110495966 | LOC106575106 | coding | upstream | 194790 | 28521480 ~ 28595208 (+) |
| LOC110496786 | NA | coding | upstream | 310330 | 28474349 ~ 28479668 (+) |
| zgc:174945 | LOC106574385 | coding | downstream | 1391109 | 30182232 ~ 30186368 (+) |
| cckbra | LOC106575124 | coding | downstream | 1442568 | 30233691 ~ 30254904 (+) |
| LOC118940974 | LOC108266561 | coding | downstream | 1727497 | 30518620 ~ 30519442 (+) |
| LOC110496792 | cars2 | coding | downstream | 1743891 | 30535014 ~ 30539520 (+) |
| LOC110495985 | LOC106588159 | coding | downstream | 1935684 | 30726807 ~ 30749687 (+) |
| G1534477 | NA | non-coding | upstream | 193 | 28789535 ~ 28789805 (+) |
| G1534476 | adamts5 | non-coding | upstream | 851 | 28788849 ~ 28789147 (+) |
| G1534468 | NA | non-coding | upstream | 8155 | 28779797 ~ 28781843 (+) |
| G1534466 | NA | non-coding | upstream | 11407 | 28778300 ~ 28778591 (+) |
| G1534465 | NA | non-coding | upstream | 11836 | 28777790 ~ 28778162 (+) |
| G1534480 | NA | non-coding | downstream | 1602 | 28792725 ~ 28792934 (+) |
| G1534481 | NA | non-coding | downstream | 2464 | 28793587 ~ 28793846 (+) |
| G1534483 | NA | non-coding | downstream | 5439 | 28796562 ~ 28796796 (+) |
| G1534484 | NA | non-coding | downstream | 6639 | 28797762 ~ 28798170 (+) |
| G1534485 | NA | non-coding | downstream | 8053 | 28799176 ~ 28799416 (+) |
| G1533121 | LOC106574322 | other | upstream | 751522 | 27974813 ~ 28038476 (+) |
| LOC110495958 | LOC106574318 | other | upstream | 839776 | 27943362 ~ 27958807 (+) |
| LOC110495947 | LOC106575089 | other | upstream | 1138173 | 27629477 ~ 27750060 (+) |
| G1532307 | NA | other | upstream | 2032321 | 26757369 ~ 26757677 (+) |
| G1534488 | LOC106574337 | other | downstream | 12905 | 28804028 ~ 28804673 (+) |
| G1534495 | NA | other | downstream | 21706 | 28812829 ~ 28813103 (+) |
| G1536720 | NA | other | downstream | 1506008 | 30297131 ~ 30297346 (+) |
| G1537251 | NA | other | downstream | 2031385 | 30822508 ~ 30828046 (+) |
| LOC110496006 | LOC106588175 | other | downstream | 2777768 | 31568375 ~ 31572239 (+) |
