G1534488 (LOC106574337)


Basic Information

Item Value
gene id G1534488
gene name LOC106574337
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 28804028 ~ 28804673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1756570
CGGCGTCGTGGTGGTGCTGGTTGTCGTCGTCCAGTGGGTTCTGCTGGTTCTGCCACTTGCAGAAGCTCTTGAGCGTGGCGGCTGCGTTCTTGGACACCTCCAACCCCTCCTTCTCCGTGACCATGGTCACCTTCACAACGGACAGGCGGATGGGGTTCTCGATGCTGGCATGGCCGTACAACTTGGAAGCGATGGAAGCCAGCGTGAGCAGGTAGTGGTGTAGGTCCTTGCCGTACTTCTTGGACATGGACTCGTCAGCGACCAGCAGAAGCTCCACGTGCCTGGCGCGCGAAACTGACCTCTTGCGCCGACTTCCCAGTGAGGGCGGAGAGACAGGTTTGGAGAACTGCTTCCACCATCTTCTGCCGTGCGCTCTGCTTCGCTCCTCGCCCCTGTCCAGGGTGACACCGTGCGTGTTGCGTTTCCCGTTCCCTCTGCCCTTACGCCGGTGTTTCCTCGATGCATCCATGCGCCCGCGCCCTTCCTTGGTCCCACAGCTCTCGCTCACAGGCATGGCTTCGAATCTGAAGCGCTCCTGTGTGAAGTAGTGGAGCGCGCTCTCCGCATCCTTGTCATCCAGCAAACGCACGTCGCTATCGTGTCCCTTGGCTCGGATGAGGGGTGTGATTGTGTAGCGTGCGTGTTT

Function

NR:

description
A disintegrin and metalloproteinase with thrombospondin motifs 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1756570 True 646 TUCP 0.60 1 28804028 28804673

Neighbor

gene id symbol gene type direction distance location
LOC110495972 NA coding upstream 68799 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 131335 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 159932 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 208820 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 324360 28474349 ~ 28479668 (+)
zgc:174945 LOC106574385 coding downstream 1377559 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 1429018 30233691 ~ 30254904 (+)
LOC118940974 LOC108266561 coding downstream 1713947 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 1730341 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 1922134 30726807 ~ 30749687 (+)
G1534485 NA non-coding upstream 4612 28799176 ~ 28799416 (+)
G1534484 NA non-coding upstream 5858 28797762 ~ 28798170 (+)
G1534483 NA non-coding upstream 7232 28796562 ~ 28796796 (+)
G1534481 NA non-coding upstream 10182 28793587 ~ 28793846 (+)
G1534480 NA non-coding upstream 11094 28792725 ~ 28792934 (+)
G1534490 NA non-coding downstream 2132 28806805 ~ 28807030 (+)
G1534724 NA non-coding downstream 46245 28850918 ~ 28851318 (+)
G1534766 NA non-coding downstream 75225 28879898 ~ 28880106 (+)
G1534768 NA non-coding downstream 75865 28880538 ~ 28880765 (+)
G1534785 NA non-coding downstream 86085 28890758 ~ 28890961 (+)
G1533121 LOC106574322 other upstream 765552 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 853806 27943362 ~ 27958807 (+)
LOC110495947 LOC106575089 other upstream 1152203 27629477 ~ 27750060 (+)
G1532307 NA other upstream 2046351 26757369 ~ 26757677 (+)
G1534495 NA other downstream 8156 28812829 ~ 28813103 (+)
G1536720 NA other downstream 1492458 30297131 ~ 30297346 (+)
G1537251 NA other downstream 2017835 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 2764218 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 2773494 31578096 ~ 31580320 (+)

Expression


Co-expression Network