G1534813


Basic Information

Item Value
gene id G1534813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 28911392 ~ 28911599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1756928
cctctctcattcggtcccacttcacagtagaatcctcaaacaaggttctaaagactgttgacatctagtggaagccttaggaagtgcaacataaccaatatcccactgtatctacaataggggctgagttaaaaaactacaagcctcagatttcccacttcctggttgaatttttctcaggttttcgcctgccatgtaAGTTCTGttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1756928 True 208 lncRNA 0.42 1 28911392 28911599

Neighbor

gene id symbol gene type direction distance location
LOC110495972 NA coding upstream 176163 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 238699 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 267296 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 316184 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 431724 28474349 ~ 28479668 (+)
zgc:174945 LOC106574385 coding downstream 1270633 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 1322092 30233691 ~ 30254904 (+)
LOC118940974 LOC108266561 coding downstream 1607021 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 1623415 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 1815208 30726807 ~ 30749687 (+)
G1534796 NA non-coding upstream 11826 28899179 ~ 28899566 (+)
G1534785 NA non-coding upstream 20431 28890758 ~ 28890961 (+)
G1534768 NA non-coding upstream 30627 28880538 ~ 28880765 (+)
G1534766 NA non-coding upstream 31286 28879898 ~ 28880106 (+)
G1534724 NA non-coding upstream 60074 28850918 ~ 28851318 (+)
G1534818 NA non-coding downstream 3571 28915170 ~ 28915434 (+)
G1534822 NA non-coding downstream 5837 28917436 ~ 28917806 (+)
G1534842 NA non-coding downstream 17809 28929408 ~ 28929691 (+)
G1534848 NA non-coding downstream 21780 28933379 ~ 28933610 (+)
G1534851 NA non-coding downstream 23128 28934727 ~ 28935201 (+)
G1534495 NA other upstream 98289 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 106719 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 872916 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 961170 27943362 ~ 27958807 (+)
G1536720 NA other downstream 1385532 30297131 ~ 30297346 (+)
G1537251 NA other downstream 1910909 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 2657292 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 2666568 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 2842111 31753710 ~ 31754191 (+)

Expression


Co-expression Network