G1534823


Basic Information

Item Value
gene id G1534823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 28917124 ~ 28917647 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1756938
atttcgcgttagcatttagcgttagcattagcgttagcatccagcacgcaacattaacaaaaacataaaagccttcaaataaaataatttacctttgaagaacttctgatgttttcaatgaggatactctcagttagatagcagatgctcagtttttccaaaaagattccttgtgtattagaaatagctcagttttatacatcacatttggctaccaaaaaaaatccataaattcagtcctcaaaacgcaaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcatcaaggtgtttttcacatatctcttcattgatacatcgttcttggacacatgctttctcccctgaatcaaatggtaaagtagaagcagctggcaattgcgcaccgaattcgacgcaggacaccaggcggacacttggaaaatgtagtctcttatggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgctaagacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1756938 True 524 lncRNA 0.37 1 28917124 28917647

Neighbor

gene id symbol gene type direction distance location
LOC110495974 LOC106574337 coding downstream 111769 28771350 ~ 28805355 (-)
LOC110495973 LOC106574336 coding downstream 149061 28760672 ~ 28768063 (-)
LOC110495971 cyyr1 coding downstream 158439 28739018 ~ 28758685 (-)
LOC110495970 app coding downstream 185812 28689122 ~ 28731312 (-)
LOC110495969 LOC106574334 coding downstream 241132 28672829 ~ 28675992 (-)
LOC110496788 gart coding upstream 335880 29253527 ~ 29274733 (-)
LOC110495975 LOC106574338 coding upstream 496530 29414177 ~ 29841599 (-)
LOC110495976 NA coding upstream 578646 29496293 ~ 29497472 (-)
LOC110495979 LOC106574339 coding upstream 1399729 30317376 ~ 30396869 (-)
LOC110496790 lig4 coding upstream 1500196 30417843 ~ 30441655 (-)
G1534815 NA non-coding downstream 4431 28912434 ~ 28912693 (-)
G1534812 NA non-coding downstream 6103 28910795 ~ 28911021 (-)
G1534811 NA non-coding downstream 6440 28910422 ~ 28910684 (-)
G1534798 NA non-coding downstream 17122 28899770 ~ 28900002 (-)
G1534778 NA non-coding downstream 31503 28885415 ~ 28885621 (-)
G1534830 NA non-coding upstream 3534 28921181 ~ 28921537 (-)
G1534888 NA non-coding upstream 61481 28979128 ~ 28979359 (-)
G1535015 NA non-coding upstream 139864 29057511 ~ 29057910 (-)
G1535041 NA non-coding upstream 155782 29073429 ~ 29073826 (-)
G1535047 NA non-coding upstream 158564 29076211 ~ 29076700 (-)
LOC110495963 LOC106574327 other downstream 564506 28241494 ~ 28368147 (-)
LOC110495955 LOC106574324 other downstream 880508 27995381 ~ 28092196 (-)
LOC110496785 LOC106574363 other downstream 1002604 27839770 ~ 27914607 (-)
LOC110495948 LOC106574314 other downstream 1118511 27754174 ~ 27798978 (-)
G1533378 NA other downstream 1727575 27187622 ~ 27189549 (-)
G1536703 NA other upstream 1366725 30284372 ~ 30284762 (-)
G1537022 NA other upstream 1602245 30519892 ~ 30525373 (-)
G1537091 NA other upstream 1685069 30602716 ~ 30603392 (-)
LOC110495992 LOC106588166 other upstream 1994180 30911827 ~ 30955199 (-)
LOC110495994 LOC106588168 other upstream 2094231 31008756 ~ 31014201 (-)

Expression


Co-expression Network