G1535012


Basic Information

Item Value
gene id G1535012
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 29055532 ~ 29055755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1757132
taacaagattcaacaactgagacataaactgaacaagttgcacagacatgtaactaacagaaatggaataatgtatcCCTAAACAAAGgggtggtcaaaatcaaaagtaacagtcagtatctggtgtggccaccagctgcattaagtactgcaatgcatctcctcctcatggactgcaccagatttgccagttcttgctgtgggattttacccaactcttccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1757132 True 224 lncRNA 0.42 1 29055532 29055755

Neighbor

gene id symbol gene type direction distance location
LOC110495972 NA coding upstream 320303 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 382839 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 411436 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 460324 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 575864 28474349 ~ 28479668 (+)
zgc:174945 LOC106574385 coding downstream 1126477 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 1177936 30233691 ~ 30254904 (+)
LOC118940974 LOC108266561 coding downstream 1462865 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 1479259 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 1671052 30726807 ~ 30749687 (+)
G1534975 NA non-coding upstream 21703 29033467 ~ 29033829 (+)
G1534974 NA non-coding upstream 22222 29032860 ~ 29033310 (+)
G1534893 NA non-coding upstream 22721 28981716 ~ 29032811 (+)
G1534851 NA non-coding upstream 120331 28934727 ~ 28935201 (+)
G1534848 NA non-coding upstream 121922 28933379 ~ 28933610 (+)
G1535037 NA non-coding downstream 15237 29070992 ~ 29071284 (+)
G1535048 NA non-coding downstream 22000 29077755 ~ 29077964 (+)
G1535226 NA non-coding downstream 143794 29199549 ~ 29199760 (+)
G1535238 NA non-coding downstream 153455 29209210 ~ 29209489 (+)
G1535330 NA non-coding downstream 211883 29267638 ~ 29268186 (+)
G1534495 NA other upstream 242429 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 250859 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 1017056 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 1105310 27943362 ~ 27958807 (+)
G1536720 NA other downstream 1241376 30297131 ~ 30297346 (+)
G1537251 NA other downstream 1766753 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 2513136 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 2522412 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 2697955 31753710 ~ 31754191 (+)

Expression


Co-expression Network