G1535047


Basic Information

Item Value
gene id G1535047
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 29076211 ~ 29076700 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1757167
cgcacacacatacactgtggTGCTGTCACCAGTCCAGAGAGACACTTCCACACCTTTGGCCTGGCTATGGTTGGAGAGGCCAGCCCGAGCCCAGTGCACTTTGTTGCTAAGCTTTTTTGTGCTTTTCTGCTGATatgcagtggggagaacaagttttTGAaatactgccgattttgcaggttttcctacttacaaagcatgtagaggtctgtaatttttatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattcatttgcattttattgcatgacataagtatttgatcacctaccaaccagtaagaattctggctctcacagacgtgttagtttttctttaagaagccctcctgttctccactcattacctgtattaattgcacctgtttgaactcgttacctgtatgatagacacctgtccacacactcaatcaaacagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1757167 True 490 lncRNA 0.41 1 29076211 29076700

Neighbor

gene id symbol gene type direction distance location
LOC110495974 LOC106574337 coding downstream 270856 28771350 ~ 28805355 (-)
LOC110495973 LOC106574336 coding downstream 308148 28760672 ~ 28768063 (-)
LOC110495971 cyyr1 coding downstream 317526 28739018 ~ 28758685 (-)
LOC110495970 app coding downstream 344899 28689122 ~ 28731312 (-)
LOC110495969 LOC106574334 coding downstream 400219 28672829 ~ 28675992 (-)
LOC110496788 gart coding upstream 176827 29253527 ~ 29274733 (-)
LOC110495975 LOC106574338 coding upstream 337477 29414177 ~ 29841599 (-)
LOC110495976 NA coding upstream 419593 29496293 ~ 29497472 (-)
LOC110495979 LOC106574339 coding upstream 1240676 30317376 ~ 30396869 (-)
LOC110496790 lig4 coding upstream 1341143 30417843 ~ 30441655 (-)
G1535041 NA non-coding downstream 2385 29073429 ~ 29073826 (-)
G1535015 NA non-coding downstream 18301 29057511 ~ 29057910 (-)
G1534888 NA non-coding downstream 96852 28979128 ~ 28979359 (-)
G1534830 NA non-coding downstream 154674 28921181 ~ 28921537 (-)
G1534823 NA non-coding downstream 158564 28917124 ~ 28917647 (-)
G1535062 NA non-coding upstream 9931 29086631 ~ 29086901 (-)
G1535156 NA non-coding upstream 72782 29149482 ~ 29149682 (-)
G1535335 NA non-coding upstream 196003 29272703 ~ 29273015 (-)
G1536211 NA non-coding upstream 826040 29902740 ~ 29902941 (-)
LOC110495963 LOC106574327 other downstream 723593 28241494 ~ 28368147 (-)
LOC110495955 LOC106574324 other downstream 1039595 27995381 ~ 28092196 (-)
LOC110496785 LOC106574363 other downstream 1161691 27839770 ~ 27914607 (-)
LOC110495948 LOC106574314 other downstream 1277598 27754174 ~ 27798978 (-)
G1533378 NA other downstream 1886662 27187622 ~ 27189549 (-)
G1536703 NA other upstream 1207672 30284372 ~ 30284762 (-)
G1537022 NA other upstream 1443192 30519892 ~ 30525373 (-)
G1537091 NA other upstream 1526016 30602716 ~ 30603392 (-)
LOC110495992 LOC106588166 other upstream 1835127 30911827 ~ 30955199 (-)
LOC110495994 LOC106588168 other upstream 1935178 31008756 ~ 31014201 (-)

Expression


Co-expression Network