G1535330


Basic Information

Item Value
gene id G1535330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 29267638 ~ 29268186 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1757457
agtgacgcccagcccgtgaacgggaccgttatcatcatctgacactaattagcataacgcaacggacataaatcttcctagaaaatattcctattcatgaaaatcacaagtgaaatatattggaacacagcttagccttttgttaatcaccctgtcatctcagattttcaaaatatgctttacagccaacgctagacaagcatttgtgtaagtttatcatagcctagcatagcattatgccttgctagcagcaggcaaacttgtcacggaaatcagaaaagcaatcaaattaaatagtttacctttgatgaacttcagatgttttcactcacgagactcccaggtagacagccaaagttcatttttttcccaaaatattatttttgtaggcgaaatagctccgttgttcttcacgtttggctgagaaatcgcccggaaattgcggtcaccacaacagcgaaaaatattcaaaattagctccataatatcgacaaacatggcaaacgttgtttagaatccatcctcaaggtgtttttctaatatctattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1757457 True 549 lncRNA 0.38 1 29267638 29268186

Neighbor

gene id symbol gene type direction distance location
LOC110495972 NA coding upstream 532409 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 594945 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 623542 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 672430 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 787970 28474349 ~ 28479668 (+)
zgc:174945 LOC106574385 coding downstream 914046 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 965505 30233691 ~ 30254904 (+)
LOC118940974 LOC108266561 coding downstream 1250434 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 1266828 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 1458621 30726807 ~ 30749687 (+)
G1535238 NA non-coding upstream 58149 29209210 ~ 29209489 (+)
G1535226 NA non-coding upstream 67878 29199549 ~ 29199760 (+)
G1535048 NA non-coding upstream 189674 29077755 ~ 29077964 (+)
G1535037 NA non-coding upstream 196354 29070992 ~ 29071284 (+)
G1535012 NA non-coding upstream 211883 29055532 ~ 29055755 (+)
G1535332 NA non-coding downstream 2179 29270365 ~ 29270644 (+)
G1535334 NA non-coding downstream 3617 29271803 ~ 29272088 (+)
G1535440 NA non-coding downstream 160684 29428870 ~ 29451193 (+)
G1536169 NA non-coding downstream 608123 29876309 ~ 29876539 (+)
G1536172 NA non-coding downstream 609545 29877731 ~ 29878077 (+)
G1534495 NA other upstream 454535 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 462965 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 1229162 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 1317416 27943362 ~ 27958807 (+)
G1536720 NA other downstream 1028945 30297131 ~ 30297346 (+)
G1537251 NA other downstream 1554322 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 2300705 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 2309981 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 2485524 31753710 ~ 31754191 (+)

Expression


Co-expression Network